RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 FLRT3Q9NZU0 649 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 FBXO9Q9UK97 447 aaPredicted RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 PRPF19Q9UMS4 504 aaKnown RBP5.61□□□□□ -1.51
VIM-207ENST00000495528 OR10H1Q9Y4A9 318 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 GMEB1Q9Y692 573 aa5.61□□□□□ -1.51
VIM-207ENST00000495528 RAI1Q7Z5J4 1906 aaPredicted RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 IGLV5-52A0A0A0MRZ9 124 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 CXCR6O00574 342 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 KCNAB3O43448 404 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 CD5LO43866 347 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 FCMRO60667 390 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 KCNK2O95069 426 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 PSMG1O95456 288 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 IGKV1D-16P01601 117 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 OPN1LWP04000 364 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 BCHEP06276 602 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 SOD3P08294 240 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 DANCRP0C864 163 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 HSD17B1P14061 328 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 IL7RP16871 459 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 ZNF12P17014 697 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 IL11P20809 199 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 EVI2BP34910 448 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 CDKN1AP38936 164 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 MAP3K8P41279 467 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 COMPP49747 757 aaPredicted RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 ERFP50548 548 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 DSCR9P59020 149 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 RPS3AP61247 264 aaKnown RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 MRPS22P82650 360 aaKnown RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 CDK6Q00534 326 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 FADDQ13158 208 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 SCARB2Q14108 478 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 MAPK11Q15759 364 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 ARHGAP11BQ3KRB8 267 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 HMGN2P46Q86SG4 172 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 MARCH3Q86UD3 253 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 DHFR2Q86XF0 187 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 ARHGAP24Q8N264 748 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 OR6K3Q8NGY3 331 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 FAM110BQ8TC76 370 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 SLC26A7Q8TE54 656 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 FAM216AQ8WUB2 273 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 GMPPAQ96IJ6 420 aaPredicted RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 RAB3IPQ96QF0 476 aaPredicted RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 STACQ99469 402 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 PRRG4Q9BZD6 226 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 ACTR6Q9GZN1 396 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 SLCO5A1Q9H2Y9 848 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 MMADHCQ9H3L0 296 aaPredicted RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 TMEM38AQ9H6F2 299 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 MTHFD2LQ9H903 347 aaPredicted RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 NOX4Q9NPH5 578 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 SDHAF3Q9NRP4 125 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 THUMPD1Q9NXG2 353 aaKnown RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 ABCD2Q9UBJ2 740 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 LIPT1Q9Y234 373 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 AP4B1Q9Y6B7 739 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 ABCA1O95477 2261 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 PRR14LQ5THK1 2151 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 CHD3Q12873 2000 aaKnown RBP5.6□□□□□ -1.51
VIM-207ENST00000495528 HEATR5AQ86XA9 2040 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 PCNX3Q9H6A9 2034 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 EXPH5Q8NEV8 1989 aa5.6□□□□□ -1.51
VIM-207ENST00000495528 CUBNO60494 3623 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 NPIPA5A0A0B4J1W7 369 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 A0A0G2JPF8 293 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 FAM220BPB1ANY3 271 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 HNRNPCL2B2RXH8 293 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 HNRNPCL3B7ZW38 293 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 NPIPA7E9PJI5 369 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 M0QX08 132 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 CLOCKO15516 846 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 TLX2O43763 284 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 GMFGO60234 142 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 GPRIN2O60269 458 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 SS18L1O75177 396 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 NDUFS7O75251 213 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 STX11O75558 287 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 GCM2O75603 506 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 CIB2O75838 187 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 SEC14L2O76054 403 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 PGM3O95394 542 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 H6PDO95479 791 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 STAMBPO95630 424 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 PLGP00747 810 aaPredicted RBP5.59□□□□□ -1.51
VIM-207ENST00000495528 IGHV4-39P01824 125 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 NPIPA8P0DM63 369 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 HNRNPCL4P0DMR1 293 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 FCGR1AP12314 374 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 GGT1P19440 569 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 ATP6V1C1P21283 382 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 AQP1P29972 269 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 CDAP32320 146 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 KDELR2P33947 212 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 ACVR1BP36896 505 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 MAGEA8P43361 318 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 CTBP2P56545 445 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 PSPHP78330 225 aa5.59□□□□□ -1.51
VIM-207ENST00000495528 RBBP4Q09028 425 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms