RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 MMP7P09237 267 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 CECR9P0C854 216 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF32P17041 273 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 RPS7P62081 194 aaKnown RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 RIPK1Q13546 671 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 RAB39AQ14964 217 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 KLHL12Q53G59 568 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 SLC35D3Q5M8T2 416 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 OGFRL1Q5TC84 451 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 SLC22A25Q6T423 547 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 UGT2A3Q6UWM9 527 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 PIAS4Q8N2W9 510 aaPredicted RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 TCEANCQ8N8B7 351 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF555Q8NEP9 628 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 OR51L1Q8NGJ5 315 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 OR8J1Q8NGP2 316 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 OR1J2Q8NGS2 313 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 OR2AJ1Q8NGZ0 328 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 FGFBP3Q8TAT2 258 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 TMEM163Q8TC26 289 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 TRUB1Q8WWH5 349 aaKnown RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 PTP4A1Q93096 173 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 FBXO17Q96EF6 278 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 TMEM204Q9BSN7 226 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 MED20Q9H944 212 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 HINT3Q9NQE9 182 aaKnown RBP14.88□□□□□ -0.03
HDAC6-235ENST00000495515 ASH2LQ9UBL3 628 aa14.88□□□□□ -0.03
HDAC6-235ENST00000495515 PRKYO43930 277 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 TFP02787 698 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 SCG5P05408 212 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF14P17017 642 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-235ENST00000495515 LOXP28300 417 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-235ENST00000495515 GGT2P36268 569 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 ADAM8P78325 824 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 NAAAQ02083 359 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 PABPC1L2AQ5JQF8 200 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 LCN1P1Q5VSP4 162 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF704Q6ZNC4 412 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-235ENST00000495515 GJC3Q8NFK1 279 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 FAM81AQ8TBF8 368 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 HS3ST6Q96QI5 342 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 HCAR1Q9BXC0 346 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 OR2H1Q9GZK4 316 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 VCX3BQ9H321 246 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 NOX3Q9HBY0 568 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 NKX1-2Q9UD57 310 aaPredicted RBP14.87□□□□□ -0.03
HDAC6-235ENST00000495515 POU2F3Q9UKI9 436 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 EDARQ9UNE0 448 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 GMPPBQ9Y5P6 360 aa14.87□□□□□ -0.03
HDAC6-235ENST00000495515 GPANK1O95872 356 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 CLUP10909 449 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 GSTT1P30711 240 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 APLNRP35414 380 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 PSG4Q00888 419 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 MEP1BQ16820 701 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 TBC1D28Q2M2D7 210 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 NXNL2Q5VZ03 156 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 ADAM5Q6NVV9 412 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 CDC20BQ86Y33 519 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 GID4Q8IVV7 300 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 SLC30A7Q8NEW0 376 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF75AQ96N20 296 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 IL4I1Q96RQ9 567 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 MBOAT4Q96T53 435 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 NDRG4Q9ULP0 352 aaKnown RBP14.86□□□□□ -0.03
HDAC6-235ENST00000495515 RRP15Q9Y3B9 282 aaKnown RBP14.86□□□□□ -0.03
HDAC6-235ENST00000495515 SPEF1Q9Y4P9 236 aa14.86□□□□□ -0.03
HDAC6-235ENST00000495515 LOC100130705A0A1B0GUX0 176 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 TVP23AA6NH52 213 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 SGCEO43556 437 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 MPZL2O60487 215 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 CELA3BP08861 270 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 ENTPD1P49961 510 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 EFNB1P98172 346 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 APOFQ13790 326 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 LINC01590Q5TEZ4 76 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 TTC23Q5W5X9 447 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF511Q8NB15 262 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 OR4F15Q8NGB8 312 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 MS4A3Q96HJ5 214 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 INTS14Q96SY0 518 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 PITX2Q99697 317 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 APOL4Q9BPW4 351 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 CDH20Q9HBT6 801 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 FAM118AQ9NWS6 357 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 MRPL22Q9NWU5 206 aaKnown RBP14.85□□□□□ -0.03
HDAC6-235ENST00000495515 PLEK2Q9NYT0 353 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 CYB5R1Q9UHQ9 305 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 COMMD3-BMI1R4GMX3 469 aa14.85□□□□□ -0.03
HDAC6-235ENST00000495515 SLC22A31A6NKX4 558 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 VSTM5A8MXK1 200 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 ZNF593O00488 134 aaPredicted RBP14.84□□□□□ -0.03
HDAC6-235ENST00000495515 SLC16A6O15403 523 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 DOK2O60496 412 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 COX5BP10606 129 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 PRF1P14222 555 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 STOMP27105 288 aa14.84□□□□□ -0.03
HDAC6-235ENST00000495515 GDI2P50395 445 aaKnown RBP14.84□□□□□ -0.03
HDAC6-235ENST00000495515 CDH11P55287 796 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms