RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SNX18Q96RF0 628 aa13.76□□□□□ -0.21
LIME1-209ENST00000494776 VRK1Q99986 396 aaPredicted RBP13.76□□□□□ -0.21
LIME1-209ENST00000494776 NIPSNAP1Q9BPW8 284 aa13.76□□□□□ -0.21
LIME1-209ENST00000494776 WACQ9BTA9 647 aa13.76□□□□□ -0.21
LIME1-209ENST00000494776 BDH2Q9BUT1 245 aa13.76□□□□□ -0.21
LIME1-209ENST00000494776 PLA2G12AQ9BZM1 189 aa13.76□□□□□ -0.21
LIME1-209ENST00000494776 OR51B6Q9H340 312 aa13.76□□□□□ -0.21
LIME1-209ENST00000494776 EIF3KQ9UBQ5 218 aaKnown RBP13.76□□□□□ -0.21
LIME1-209ENST00000494776 FBXO9Q9UK97 447 aaPredicted RBP13.76□□□□□ -0.21
LIME1-209ENST00000494776 POLR1DQ9Y2S0 133 aa13.76□□□□□ -0.21
LIME1-209ENST00000494776 C5orf49A4QMS7 147 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 ARRDC5A6NEK1 342 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 H3BN98 237 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 H7C417 338 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 EBAG9O00559 213 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 SSX4O60224 188 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 GPRIN2O60269 458 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 DEAF1O75398 565 aaPredicted RBP13.75□□□□□ -0.21
LIME1-209ENST00000494776 TIPRLO75663 272 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 MPZL1O95297 269 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 SNAP29O95721 258 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 SCG5P05408 212 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 LCKP06239 509 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 IGFBP1P08833 259 aaPredicted RBP13.75□□□□□ -0.21
LIME1-209ENST00000494776 RAD52P43351 418 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 SCRN3Q0VDG4 424 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 TMEM179BQ7Z7N9 219 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 SVOPLQ8N434 492 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 PAQR4Q8N4S7 273 aaPredicted RBP13.75□□□□□ -0.21
LIME1-209ENST00000494776 ICA1LQ8NDH6 482 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 OR2T33Q8NG76 320 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 TEX47Q8TBZ9 253 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 SLCO4A1Q96BD0 722 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 WNT5BQ9H1J7 359 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 FN3KQ9H479 309 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 DYNLRB1Q9NP97 96 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 ARMC1Q9NVT9 282 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 B9D1Q9UPM9 204 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 BAIAP2Q9UQB8 552 aa13.75□□□□□ -0.21
LIME1-209ENST00000494776 TRIM64A6NGJ6 449 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 TRIM64BA6NI03 449 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 BHLHE40O14503 412 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 HLA-DQA2P01906 255 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 ERCC1P07992 297 aaPredicted RBP13.74□□□□□ -0.21
LIME1-209ENST00000494776 UCP2P55851 309 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 SELENOVP59797 346 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 LSM6P62312 80 aaKnown RBP13.74□□□□□ -0.21
LIME1-209ENST00000494776 GLO1Q04760 184 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 AQP6Q13520 282 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 OTPQ5XKR4 325 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 RGS7BPQ6MZT1 257 aaPredicted RBP13.74□□□□□ -0.21
LIME1-209ENST00000494776 ZNF774Q6NX45 483 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 UNQ6126/PRO20091Q6UXV3 157 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 CD300LDQ6UXZ3 194 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 OR6V1Q8N148 313 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 ATG16L2Q8NAA4 619 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 OR10H5Q8NGA6 315 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 OR8D4Q8NGM9 314 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 C11orf40Q8WZ69 217 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 MRPL24Q96A35 216 aaKnown RBP13.74□□□□□ -0.21
LIME1-209ENST00000494776 BCL2L14Q9BZR8 327 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 DUSP13Q9UII6 198 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 KLHL21Q9UJP4 597 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 FZR1Q9UM11 496 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 FKBP7Q9Y680 259 aa13.74□□□□□ -0.21
LIME1-209ENST00000494776 ARID1AO14497 2285 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 OR6C68A6NDL8 312 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 FAM171A2A8MVW0 826 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 H7C1Q1 480 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 DCTN6O00399 190 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 SGCEO43556 437 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 DOK2O60496 412 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 GPANK1O95872 356 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 IFNGP01579 166 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 ANXA8P13928 327 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 PRKACGP22612 351 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 POU1F1P28069 291 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 PCSK6P29122 969 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 SLC36A3Q495N2 470 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 ASRGL1Q7L266 308 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 HS3ST5Q8IZT8 346 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 LNX2Q8N448 690 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 CYB561A3Q8NBI2 242 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 NPEPL1Q8NDH3 523 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 PROKR2Q8NFJ6 384 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 C18orf12Q96KH6 178 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 POM121L2Q96KW2 1035 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 SYT3Q9BQG1 590 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 CDADC1Q9BWV3 514 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
LIME1-209ENST00000494776 RACGAP1Q9H0H5 632 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 RAB1BQ9H0U4 201 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 PLEK2Q9NYT0 353 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 KIF17Q9P2E2 1029 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 ASH2LQ9UBL3 628 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 NDRG4Q9ULP0 352 aaKnown RBP13.73□□□□□ -0.21
LIME1-209ENST00000494776 AP4S1Q9Y587 144 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 USF3Q68DE3 2245 aa13.73□□□□□ -0.21
LIME1-209ENST00000494776 MTORP42345 2549 aa13.72□□□□□ -0.21
LIME1-209ENST00000494776 LOC100509620A0A075B734 347 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms