RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 CDH15P55291 814 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 TMEM33P57088 247 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 MVKQ03426 396 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 ZNF718Q3SXZ3 478 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 ZBED5Q49AG3 693 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 TMPRSS11FQ6ZWK6 438 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 CYP4Z1Q86W10 505 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 FAM156AQ8NDB6 213 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 OR52J3Q8NH60 311 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 SLC25A40Q8TBP6 338 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 SNX33Q8WV41 574 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 HPS1Q92902 700 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 CMTM5Q96DZ9 223 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 FAM46AQ96IP4 442 aaKnown RBP8.19□□□□□ -1.1
MSH5-218ENST00000494646 Q96M85 177 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 ZNF416Q9BWM5 594 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 OR2H1Q9GZK4 316 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 OR2J1Q9GZK6 312 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 WNT5BQ9H1J7 359 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 SMURF2Q9HAU4 748 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 DECR2Q9NUI1 292 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 SLCO1C1Q9NYB5 712 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 IL20RAQ9UHF4 553 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 TIMM10BQ9Y5J6 103 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 ENPP4Q9Y6X5 453 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 V9GYQ6 96 aa8.19□□□□□ -1.1
MSH5-218ENST00000494646 A6NIZ1 184 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 PTP4A3O75365 173 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 IGHV3-13P01766 116 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 H1F0P07305 194 aaKnown RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 CD14P08571 375 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 NR2C1P13056 603 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 ZNF26P17031 533 aaPredicted RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 RBMXP38159 391 aaKnown RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 CRYBB2P43320 205 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 ZNF81P51508 661 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 GYS2P54840 703 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 RAP1BP61224 184 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 RAP1AP62834 184 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 HNRNPA0Q13151 305 aaKnown RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 ENDOGQ14249 297 aaKnown RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 MOGQ16653 247 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 KRTAP24-1Q3LI83 254 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 ANKDD1AQ495B1 522 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 TMEM255AQ5JRV8 349 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 FGD3Q5JSP0 725 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 HACD2Q6Y1H2 254 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 RINLQ6ZS11 566 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 USP51Q70EK9 711 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 CPLX4Q7Z7G2 160 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 ABHD4Q8TB40 342 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 FNDC8Q8TC99 324 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 SLC7A13Q8TCU3 470 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 IPCEF1Q8WWN9 437 aaPredicted RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 RASD2Q96D21 266 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 MARS2Q96GW9 593 aaKnown RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 C4orf45Q96LM5 186 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 ZNF570Q96NI8 536 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 MYLK2Q9H1R3 596 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 POLE4Q9NR33 117 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 RPS6KA6Q9UK32 745 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 FAM32AQ9Y421 112 aaKnown RBP8.18□□□□□ -1.1
MSH5-218ENST00000494646 CACNG2Q9Y698 323 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 STAB1Q9NY15 2570 aa8.18□□□□□ -1.1
MSH5-218ENST00000494646 TRBV4-1A0A0J9YWV2 114 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 GMNCA6NCL1 334 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 C12orf71A8MTZ7 269 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 B4DSR2 109 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 NDUFAB1O14561 156 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 XKRYO14609 159 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 GMNNO75496 209 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 RP2O75695 350 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 MPZL1O95297 269 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 GPANK1O95872 356 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 MT-ND5P03915 603 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 MSR1P21757 451 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 CENPAP49450 140 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 PCBD1P61457 104 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 LMO4P61968 165 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 PPP1CBP62140 327 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 DBPQ10586 325 aaPredicted RBP8.17□□□□□ -1.1
MSH5-218ENST00000494646 SEC23BQ15437 767 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 PCGF3Q3KNV8 242 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 SPRNQ5BIV9 151 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 MESTQ5EB52 335 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 C1orf94Q6P1W5 598 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 THSD4Q6ZMP0 1018 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 FOXL2NBQ6ZUU3 175 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 RFPL4BQ6ZWI9 263 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 ZNF771Q7L3S4 317 aaPredicted RBP8.17□□□□□ -1.1
MSH5-218ENST00000494646 FAM86B1Q8N7N1 296 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 KLF14Q8TD94 323 aaPredicted RBP8.17□□□□□ -1.1
MSH5-218ENST00000494646 SLC7A6Q92536 515 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 CCL17Q92583 94 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 C1orf159Q96HA4 380 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 C7orf34Q96L11 122 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 GPA33Q99795 319 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 RACGAP1Q9H0H5 632 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 POFUT1Q9H488 388 aa8.17□□□□□ -1.1
MSH5-218ENST00000494646 MSL2Q9HCI7 577 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms