RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 TXNIPQ9H3M7 391 aa10.69□□□□□ -0.7
SKA1-205ENST00000494518 EMC7Q9NPA0 242 aa10.69□□□□□ -0.7
SKA1-205ENST00000494518 MMP26Q9NRE1 261 aa10.69□□□□□ -0.7
SKA1-205ENST00000494518 INTS9Q9NV88 658 aaKnown RBP10.69□□□□□ -0.7
SKA1-205ENST00000494518 TGP01266 2768 aa10.69□□□□□ -0.7
SKA1-205ENST00000494518 TRAV27A0A087WT01 109 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 FSHBP01225 129 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 SCG5P05408 212 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 VIMP08670 466 aaKnown RBP10.68□□□□□ -0.7
SKA1-205ENST00000494518 YAP1P46937 504 aaKnown RBP10.68□□□□□ -0.7
SKA1-205ENST00000494518 LIMS1P48059 325 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 CTXN1P60606 82 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 TNFAIP6P98066 277 aaPredicted RBP10.68□□□□□ -0.7
SKA1-205ENST00000494518 MBNL2Q5VZF2 373 aaKnown RBP10.68□□□□□ -0.7
SKA1-205ENST00000494518 BCL6BQ8N143 479 aaPredicted RBP10.68□□□□□ -0.7
SKA1-205ENST00000494518 SGMS2Q8NHU3 365 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 TAF15Q92804 592 aaKnown RBP eCLIP10.68□□□□□ -0.7
SKA1-205ENST00000494518 TPD52L3Q96J77 140 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 ECSITQ9BQ95 431 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 SMURF2Q9HAU4 748 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 DDX28Q9NUL7 540 aaKnown RBP10.68□□□□□ -0.7
SKA1-205ENST00000494518 STX18Q9P2W9 335 aaKnown RBP10.68□□□□□ -0.7
SKA1-205ENST00000494518 RHCGQ9UBD6 479 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 BAG5Q9UL15 447 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 NPTNQ9Y639 398 aa10.68□□□□□ -0.7
SKA1-205ENST00000494518 FXYD1O00168 92 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 ABHD16AO95870 558 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 IGHV2-70P01814 119 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 CST2P09228 141 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 TSPAN19P0C672 248 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 FPR2P25090 351 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 RPL27P61353 136 aaKnown RBP10.67□□□□□ -0.7
SKA1-205ENST00000494518 SLC3A1Q07837 685 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 PSG7Q13046 419 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 CYLC2Q14093 348 aaPredicted RBP10.67□□□□□ -0.7
SKA1-205ENST00000494518 ENDOGQ14249 297 aaKnown RBP10.67□□□□□ -0.7
SKA1-205ENST00000494518 CYBRD1Q53TN4 286 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 ARMCX4Q5H9R4 360 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 MTX3Q5HYI7 312 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 FAM27BQ5VT28 67 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 CALHM3Q86XJ0 350 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 TREML1Q86YW5 311 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 ALDH16A1Q8IZ83 802 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 DEFB108BQ8NET1 73 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 OR2Z1Q8NG97 314 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 OR51A7Q8NH64 312 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 DVL3Q92997 716 aaPredicted RBP10.67□□□□□ -0.7
SKA1-205ENST00000494518 BPIFA2Q96DR5 249 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 C4orf45Q96LM5 186 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 MAGEB18Q96M61 343 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 RBP7Q96R05 134 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 ALG12Q9BV10 488 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 GMPR2Q9P2T1 348 aaKnown RBP10.67□□□□□ -0.7
SKA1-205ENST00000494518 ZNF69Q9UC07 566 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 EGFL7Q9UHF1 273 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 HIF3AQ9Y2N7 669 aa10.67□□□□□ -0.7
SKA1-205ENST00000494518 IGHV3OR16-10A0A075B7F0 116 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 DNAJC9-AS1A6NH13 148 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 TRAPPC2LH3BP13 241 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 J3KTA2 159 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 FOXH1O75593 365 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 GATA3P23771 443 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 HTR5AP47898 357 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 ERFP50548 548 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 ARHGDIAP52565 204 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 C1orf94Q6P1W5 598 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 UNQ6126/PRO20091Q6UXV3 157 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 RBMS3Q6XE24 437 aaKnown RBP10.66□□□□□ -0.7
SKA1-205ENST00000494518 JAZF1Q86VZ6 243 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 NRMQ8IXM6 262 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 LRRC75AQ8NAA5 344 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 OR13C2Q8NGS9 318 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 TSPEARQ8WU66 669 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 ITLN1Q8WWA0 313 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 LIPHQ8WWY8 451 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 SLC7A6Q92536 515 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 LRRC58Q96CX6 371 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 ZNF583Q96ND8 569 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 ELOVL3Q9HB03 270 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 CYSLTR2Q9NS75 346 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 TMEM106BQ9NUM4 274 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 KLHL21Q9UJP4 597 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 PURGQ9UJV8 347 aaKnown RBP10.66□□□□□ -0.7
SKA1-205ENST00000494518 ZDHHC8Q9ULC8 765 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 A4GNTQ9UNA3 340 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 TIMM10BQ9Y5J6 103 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 SOX21Q9Y651 276 aaPredicted RBP10.66□□□□□ -0.7
SKA1-205ENST00000494518 WNK1Q9H4A3 2382 aa10.66□□□□□ -0.7
SKA1-205ENST00000494518 GMNCA6NCL1 334 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 NPIPB13A6NJU9 1138 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 NPIPB4C9JG80 1138 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 MRASO14807 208 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 TMPRSS2O15393 492 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 DOK2O60496 412 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 EDF1O60869 148 aaKnown RBP10.65□□□□□ -0.7
SKA1-205ENST00000494518 ZNF205O95201 554 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 IGF2P01344 180 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 IGHMP01871 453 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 CD55P08174 381 aa10.65□□□□□ -0.7
SKA1-205ENST00000494518 ADH4P08319 380 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms