RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 SCARB1Q8WTV0 552 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 ST8SIA1Q92185 356 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 SARAFQ96BY9 339 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 LAT2Q9GZY6 243 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 GFOD1Q9NXC2 390 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 CHST2Q9Y4C5 530 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 FGF17O60258 216 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 DIO1P49895 249 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 PCNPQ8WW12 178 aaKnown RBP17.5■□□□□ 0.39
COL27A1-207ENST00000494090 SCPEP1Q9HB40 452 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 NTNG1Q9Y2I2 539 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 SLC2A10O95528 541 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 ETHE1O95571 254 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 HIST1H1CP16403 213 aaKnown RBP17.5■□□□□ 0.39
COL27A1-207ENST00000494090 PPT1P50897 306 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 SYS1Q8N2H4 156 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 BCL7CQ8WUZ0 217 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-207ENST00000494090 LINC00615Q96LM1 132 aaPredicted RBP17.5■□□□□ 0.39
COL27A1-207ENST00000494090 POFUT1Q9H488 388 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 IDSB3KWA1 339 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 MYOGP15173 224 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 SPI1P17947 270 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 ANGPTL5Q86XS5 388 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 BCORP1Q8N888 145 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 OR51S1Q8NGJ8 323 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 DCLRE1CQ96SD1 692 aaKnown RBP17.5■□□□□ 0.39
COL27A1-207ENST00000494090 NUDT9Q9BW91 350 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 SAMD10Q9BYL1 202 aa17.5■□□□□ 0.39
COL27A1-207ENST00000494090 MYO9BQ13459 2157 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 SULT1C4O75897 302 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 BAXQ07812 192 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 TMUB2Q71RG4 321 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 EMG1Q92979 244 aaKnown RBP17.49■□□□□ 0.39
COL27A1-207ENST00000494090 POLDIP2Q9Y2S7 368 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 GIPP09681 153 aaPredicted RBP17.49■□□□□ 0.39
COL27A1-207ENST00000494090 PRR35P0CG20 571 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 GNB3P16520 340 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 CNR1P21554 472 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 SDHAP31040 664 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 RAB5CP51148 216 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 SLC39A9Q9NUM3 307 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 TIMM10BQ9Y5J6 103 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 CXorf51AA0A1B0GTR3 108 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 APOA2P02652 100 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 HSF1Q00613 529 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 DPPA2Q7Z7J5 298 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 ZMAT3Q9HA38 289 aaKnown RBP17.49■□□□□ 0.39
COL27A1-207ENST00000494090 DSCR3O14972 297 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 DEGS1O15121 323 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 DFFBO76075 338 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 ARR3P36575 388 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 UBE2KP61086 200 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 SLC35G3Q8N808 338 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 FAM71CQ8NEG0 241 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 KCNE4Q8WWG9 221 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 ZPBPQ9BS86 351 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 SEMA4CQ9C0C4 833 aa17.49■□□□□ 0.39
COL27A1-207ENST00000494090 A0A087WV62 115 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 RPS10-NUDT3A0A1W2PQS6 291 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 HSPB6O14558 160 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 AKR7A3O95154 331 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 NME2P22392 152 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 RPS10P46783 165 aaKnown RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 IAH1Q2TAA2 248 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 OR52I2Q8NH67 350 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 PIGTQ969N2 578 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 AKIP1Q9NQ31 210 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 PCDHGA5Q9Y5G8 931 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 MYH14Q7Z406 1995 aaKnown RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 HSPB2A8KAH6 182 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 FCMRO60667 390 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 ANXA7P20073 488 aaKnown RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 HSPB2Q16082 182 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 AARDQ4LEZ3 155 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 NRSN2Q9GZP1 204 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 CGGBP1Q9UFW8 167 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 PHF1O43189 567 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 PEX11BO96011 259 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 GLAP06280 429 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 SPNS2Q8IVW8 549 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 ADGRF3Q8IZF5 1079 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 MED18Q9BUE0 208 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 RAB19A4D1S5 217 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 CXCL10P02778 98 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 AADACP22760 399 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 CAPZBP47756 277 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 GSK3AP49840 483 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 MRPS34P82930 218 aaKnown RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 ZNF628Q5EBL2 1059 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 CALHM3Q86XJ0 350 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 ZFP82Q8N141 532 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 CISD2Q8N5K1 135 aaKnown RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 JAM3Q9BX67 310 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 C12orf49Q9H741 205 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 FGF20Q9NP95 211 aaPredicted RBP17.48■□□□□ 0.39
COL27A1-207ENST00000494090 GNG13Q9P2W3 67 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 COL18A1P39060 1754 aa17.48■□□□□ 0.39
COL27A1-207ENST00000494090 ARAP2Q8WZ64 1704 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 M0R082 166 aa17.47■□□□□ 0.39
COL27A1-207ENST00000494090 B4GALT3O60512 393 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms