RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 VN1R2Q8NFZ6 395 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 ACER1Q8TDN7 264 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 CCDC12Q8WUD4 166 aaPredicted RBP3.52□□□□□ -1.85
VPS13A-212ENST00000493341 ZBED3Q96IU2 234 aaPredicted RBP3.52□□□□□ -1.85
VPS13A-212ENST00000493341 ZNF599Q96NL3 588 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 SIGLEC12Q96PQ1 595 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 ARHGDIGQ99819 225 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 SRMSQ9H3Y6 488 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 NRBP2Q9NSY0 501 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 CLN6Q9NWW5 311 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 GGA2Q9UJY4 613 aa3.52□□□□□ -1.85
VPS13A-212ENST00000493341 A0A087WWV3 80 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 PSMB11A5LHX3 300 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 IQCF5A8MTL0 148 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 AIFM1O95831 613 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 PRKAR2BP31323 418 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 CSNK1DP48730 415 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ZNF726P1Q15940 193 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 CEP85LQ5SZL2 805 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 CCNJQ5T5M9 372 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 MARC1Q5VT66 337 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 COPS6Q7L5N1 327 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ZNF440Q8IYI8 595 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 POM121L12Q8N7R1 296 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ZFP41Q8N8Y5 198 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ZNF740Q8NDX6 193 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 NOXO1Q8NFA2 376 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 OR2AP1Q8NGE2 309 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 CLHC1Q8NHS4 586 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 SUN5Q8TC36 379 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 PDCD6IPQ8WUM4 868 aaKnown RBP3.51□□□□□ -1.85
VPS13A-212ENST00000493341 RPUSD4Q96CM3 377 aaKnown RBP3.51□□□□□ -1.85
VPS13A-212ENST00000493341 SMIM14Q96QK8 99 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 LZTS2Q9BRK4 669 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 CD209Q9NNX6 404 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 TMEM9BQ9NQ34 198 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 XCL2Q9UBD3 114 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 KLK13Q9UKR3 277 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 IQGAP2Q13576 1575 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 UGGT2Q9NYU1 1516 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 KIF26BQ2KJY2 2108 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 A0A1B0GW15 77 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 CRLF1O75462 422 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 GGT1P19440 569 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ZP3P21754 424 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 IVDP26440 423 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 HTR2CP28335 458 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 GPX4P36969 197 aaPredicted RBP3.51□□□□□ -1.85
VPS13A-212ENST00000493341 CSNK1A1P48729 337 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 APOC4P55056 127 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 TAS2R19P59542 299 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 STX3Q13277 289 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 AQP6Q13520 282 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 OR7A5Q15622 319 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ZSCAN26Q16670 478 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 PTPN20Q4JDL3 420 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 TPTE2P1Q5T6R2 138 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 SPECC1LQ69YQ0 1117 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 LINC00336Q6ZUF6 198 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 SPATA24Q86W54 205 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 NKAPP1Q8N9T2 125 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 RHOXF1Q8NHV9 184 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 FCRL1Q96LA6 429 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 COL21A1Q96P44 957 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 MICU1Q9BPX6 476 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ACBD6Q9BR61 282 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 UGT1A7Q9HAW7 530 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 UGT1A8Q9HAW9 530 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 STMN3Q9NZ72 180 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 SLC17A7Q9P2U7 560 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 ST3GAL6Q9Y274 331 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 C15orf41Q9Y2V0 281 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 MAPKBP1O60336 1514 aa3.51□□□□□ -1.85
VPS13A-212ENST00000493341 POGZQ7Z3K3 1410 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 ADCY10Q96PN6 1610 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 A0A0B4J2A0 478 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 HIDE1A8MVS5 230 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 SRRM5B3KS81 715 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 H3BN98 237 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 RAD51CO43502 376 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 GKN3PP0CG01 181 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 CT45A6P0DMU7 189 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 CT45A5P0DMU8 189 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 CT45A7P0DMV0 189 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 AK4P27144 223 aaPredicted RBP3.5□□□□□ -1.85
VPS13A-212ENST00000493341 P2RY4P51582 365 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 DIO3P55073 304 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 CLDN6P56747 220 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 MXD1Q05195 221 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 FZD2Q14332 565 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 C5orf64Q2M2E5 130 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 C14orf177Q52M58 125 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 CT45A1Q5HYN5 189 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 ADAM5Q6NVV9 412 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 UNC93AQ86WB7 457 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 KLHL30-AS1Q8NEE0 82 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 OR4F15Q8NGB8 312 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 OR2A1Q8NGT9 310 aa3.5□□□□□ -1.85
VPS13A-212ENST00000493341 CT45A3Q8NHU0 189 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms