RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 OR2T33Q8NG76 320 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 OR4K13Q8NH42 304 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 COX4I2Q96KJ9 171 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 NMNAT3Q96T66 252 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 PLA2G12AQ9BZM1 189 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 WNT5BQ9H1J7 359 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 RERGLQ9H628 205 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 DNAJB9Q9UBS3 223 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 NDRG4Q9ULP0 352 aaKnown RBP9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 COA3Q9Y2R0 106 aaPredicted RBP9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 FKBP7Q9Y680 259 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 MED13LQ71F56 2210 aa9.19□□□□□ -0.94
CDC42SE1-206ENST00000492796 SETD2Q9BYW2 2564 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 IGLV1-36A0A0B4J1U3 117 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 ICMTO60725 284 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 NDUFS7O75251 213 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 DEAF1O75398 565 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 SCG5P05408 212 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 ERCC1P07992 297 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 INHBBP09529 407 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 CSF3P09919 207 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 GAAP10253 952 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 COX5BP10606 129 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 CCL2P13500 99 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 APEX1P27695 318 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 GDI2P50395 445 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 ARHGDIAP52565 204 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 DSCR9P59020 149 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 GLO1Q04760 184 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 KCNMB1Q16558 191 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 USF3Q68DE3 2245 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 RGS7BPQ6MZT1 257 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 UGT2A3Q6UWM9 527 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 ZBTB46Q86UZ6 589 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 SVOPLQ8N434 492 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 LNX2Q8N448 690 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 PAQR4Q8N4S7 273 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 SDR9C7Q8NEX9 313 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 OR52E2Q8NGJ4 325 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 OR8D4Q8NGM9 314 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 AKR7LQ8NHP1 331 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 TEX47Q8TBZ9 253 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 POM121L2Q96KW2 1035 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 FEVQ99581 238 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 DOK1Q99704 481 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 NIPSNAP1Q9BPW8 284 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 TSSK6Q9BXA6 273 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 MRPL37Q9BZE1 423 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 DYNLRB1Q9NP97 96 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 MYOZ1Q9NP98 299 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 EMC7Q9NPA0 242 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 RPRD1BQ9NQG5 326 aaKnown RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 PDP1Q9P0J1 537 aaPredicted RBP9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 ATPIF1Q9UII2 106 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 B9D1Q9UPM9 204 aa9.18□□□□□ -0.94
CDC42SE1-206ENST00000492796 FLNAP21333 2647 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 C5orf49A4QMS7 147 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 OR6C68A6NDL8 312 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 TRIM64A6NGJ6 449 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 TRIM64BA6NI03 449 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 FAM171A2A8MVW0 826 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 H7C1Q1 480 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 DCTN6O00399 190 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SGCEO43556 437 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SYNGR3O43761 229 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SSX4O60224 188 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 DOK2O60496 412 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 CIB2O75838 187 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SOX14O95416 240 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 F12P00748 615 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 TP53P04637 393 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 FAM157BP0CG42 384 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 ANXA8P13928 327 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 CCNOP22674 350 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 UCP2P55851 309 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SELENOVP59797 346 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SLC36A3Q495N2 470 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 C1orf146Q5VVC0 180 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 ZNF774Q6NX45 483 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 ARL9Q6T311 187 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 CLEC2AQ6UVW9 174 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 CCDC121Q6ZUS5 278 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 ASRGL1Q7L266 308 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 TMEM179BQ7Z7N9 219 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 BIVMQ86UB2 503 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 OR6V1Q8N148 313 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 NPEPL1Q8NDH3 523 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 DNAJC9Q8WXX5 260 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 C11orf40Q8WZ69 217 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SLCO4A1Q96BD0 722 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 NRBF2Q96F24 287 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 DUS3LQ96G46 650 aaKnown RBP9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 FOXN4Q96NZ1 517 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 TSSK2Q96PF2 358 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SORCS2Q96PQ0 1159 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 VRK1Q99986 396 aaPredicted RBP9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 RAB1BQ9H0U4 201 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 ZNF556Q9HAH1 456 aa9.17□□□□□ -0.94
CDC42SE1-206ENST00000492796 SRA1Q9HD15 236 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms