RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	PLAT	P00750	562 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	KNG1	P01042	644 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	OPN1SW	P03999	348 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	OMG	P23515	440 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	CPT2	P23786	658 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	CD80	P33681	288 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	PCGF2	P35227	344 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	MDH2	P40926	338 aa	Known RBP	12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	ERVK-25	P63136	954 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	TAF11	Q15544	211 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	SGCA	Q16586	387 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	ARMC4	Q5T2S8	1044 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	FAM27B	Q5VT28	67 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	EPGN	Q6UW88	154 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	BTNL3	Q6UXE8	466 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	C17orf107	Q6ZR85	190 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	RBM45	Q8IUH3	476 aa	Known RBP	12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	MUC20	Q8N307	709 aa	Predicted RBP	12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	VANGL1	Q8TAA9	524 aa	Predicted RBP	12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	UPRT	Q96BW1	309 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	SIGLEC11	Q96RL6	698 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	CPPED1	Q9BRF8	314 aa	Predicted RBP	12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	OR2H1	Q9GZK4	316 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	PCDHAC1	Q9H158	963 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	WNT5B	Q9H1J7	359 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	NANOG	Q9H9S0	305 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	MEPE	Q9NQ76	525 aa	Predicted RBP	12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	ARMCX1	Q9P291	453 aa		12.82	□□□□□ -0.36
AGAP3-222	ENST00000490839	DOCK11	Q5JSL3	2073 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	IGHV3OR16-10	A0A075B7F0	116 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	NGF	P01138	241 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	GSTM3	P21266	225 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	FMOD	Q06828	376 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	CD47	Q08722	323 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	PSG7	Q13046	419 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	ZNF362	Q5T0B9	420 aa	Predicted RBP	12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	ARL9	Q6T311	187 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	LRRN1	Q6UXK5	716 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	CROCCP2	Q86T23	111 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	TSPYL5	Q86VY4	417 aa	Predicted RBP	12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	PTOV1	Q86YD1	416 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	NPEPL1	Q8NDH3	523 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	OR4D11	Q8NGI4	311 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	OR4F5	Q8NH21	305 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	THOC1	Q96FV9	657 aa	Known RBP	12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	C4orf45	Q96LM5	186 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	BEX1	Q9HBH7	125 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	MAN2C1	Q9NTJ4	1040 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	CCDC167	Q9P0B6	97 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	PPP1R3C	Q9UQK1	317 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	TIMM10B	Q9Y5J6	103 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	USH1C	Q9Y6N9	552 aa		12.81	□□□□□ -0.36
AGAP3-222	ENST00000490839	IGKV1D-43	A0A0B4J1Z2	117 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	TRAV40	A0A0B4J280	105 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	CEACAM18	A8MTB9	384 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839		M0QX08	132 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	SURF4	O15260	269 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	POLR3G	O15318	223 aa	Predicted RBP	12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	HOXA3	O43365	443 aa	Predicted RBP	12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	OR7A10	O76100	309 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	MT-ND1	P03886	318 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	CST2	P09228	141 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	FUT1	P19526	365 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	CD247	P20963	164 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	TUBG1	P23258	451 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	AQP2	P41181	271 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	RAG2	P55895	527 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	PCBD1	P61457	104 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	PAX2	Q02962	417 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	CYP51A1	Q16850	503 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	OR2Z1	Q8NG97	314 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	NSMAF	Q92636	917 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	HDAC2	Q92769	488 aa	Known RBP	12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	PRSS27	Q9BQR3	290 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	SSBP3	Q9BWW4	388 aa	Predicted RBP	12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	MMP27	Q9H306	513 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	TUBG2	Q9NRH3	451 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	PDP1	Q9P0J1	537 aa	Predicted RBP	12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	IL19	Q9UHD0	177 aa		12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	NDRG4	Q9ULP0	352 aa	Known RBP	12.8	□□□□□ -0.36
AGAP3-222	ENST00000490839	IGHV2-70D	A0A0C4DH43	119 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	MDFIC2	A0A1B0GVS7	189 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	IFNL4	K9M1U5	179 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839		M0QZ24	198 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	ERLIN1	O75477	346 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	ABHD16A	O95870	558 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	IGF2	P01344	180 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	KITLG	P21583	273 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	LAP3	P28838	519 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	RBMX	P38159	391 aa	Known RBP	12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	SLC18A1	P54219	525 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	FAM205BP	Q63HN1	556 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	ZNF774	Q6NX45	483 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	SLC25A47	Q6Q0C1	308 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839		Q6ZR03	302 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	PATL1	Q86TB9	770 aa	Known RBP	12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	JAZF1	Q86VZ6	243 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	SLC30A8	Q8IWU4	369 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	FNDC8	Q8TC99	324 aa		12.79	□□□□□ -0.36
AGAP3-222	ENST00000490839	ITLN1	Q8WWA0	313 aa		12.79	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms