RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 SRSF4Q08170 494 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 MPP2Q14168 576 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 MTX3Q5HYI7 312 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 CEP85LQ5SZL2 805 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 LCE3BQ5TA77 95 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 OLFML2AQ68BL7 652 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 TTC33Q6PID6 262 aaPredicted RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 SLC2A7Q6PXP3 512 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 LRRN1Q6UXK5 716 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 MUC20Q8N307 709 aaPredicted RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 LRRC18Q8N456 261 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 TMEM86BQ8N661 226 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 KIR3DL3Q8N743 410 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 HIPK4Q8NE63 616 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 ASB10Q8WXI3 467 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 THOC1Q96FV9 657 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 MPP4Q96JB8 637 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 DCLRE1CQ96SD1 692 aaKnown RBP6.87□□□□□ -1.31
USP39-216ENST00000490193 MCHR1Q99705 422 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 ARHGDIGQ99819 225 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 PKP2Q99959 881 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 KCNN2Q9H2S1 579 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 MSL2Q9HCI7 577 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 CCNB1IP1Q9NPC3 277 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 TUBG2Q9NRH3 451 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 C1RLQ9NZP8 487 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 IL19Q9UHD0 177 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 SLC13A4Q9UKG4 626 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 UGT2A1Q9Y4X1 527 aa6.87□□□□□ -1.31
USP39-216ENST00000490193 TRAV40A0A0B4J280 105 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 IGHV2-70DA0A0C4DH43 119 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 MDFIC2A0A1B0GVS7 189 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 CLPSL1A2RUU4 121 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 CEACAM18A8MTB9 384 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 IFNL4K9M1U5 179 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 UBDO15205 165 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 TRMUO75648 421 aaKnown RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 FSTL3O95633 263 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 GPANK1O95872 356 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 HIST1H2ABP04908 130 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 TSPAN19P0C672 248 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 ACADSP16219 412 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 GPX2P18283 190 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 TNFSF4P23510 183 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 SLC6A2P23975 617 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 PCGF2P35227 344 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 DAP3P51398 398 aaKnown RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 UGT2B15P54855 530 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 PCBP3P57721 371 aaKnown RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 PSG4Q00888 419 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 PSG7Q13046 419 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 HNRNPA0Q13151 305 aaKnown RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 SCARB2Q14108 478 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 NPTX1Q15818 432 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 DEFB112Q30KQ8 113 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 FBLN7Q53RD9 439 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 TNFAIP8L3Q5GJ75 292 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 ENTPD8Q5MY95 495 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 ARMC4Q5T2S8 1044 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 FAM27BQ5VT28 67 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 NXNQ6DKJ4 435 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 ASPHD2Q6ICH7 369 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 BTNL3Q6UXE8 466 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 HIST3H2AQ7L7L0 130 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 NANOGNBQ7Z5D8 188 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 ARMC8Q8IUR7 673 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 POU5F2Q8N7G0 328 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 NPEPL1Q8NDH3 523 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 OR6T1Q8NGN1 323 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 AKR7LQ8NHP1 331 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 VANGL1Q8TAA9 524 aaPredicted RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 ABHD4Q8TB40 342 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 ADAMTS16Q8TE57 1224 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 AENQ8WTP8 325 aaKnown RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 RAB40AQ8WXH6 277 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 HIST1H2ACQ93077 130 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 CCT8L2Q96SF2 557 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 RBM4BQ9BQ04 359 aaKnown RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 OCSTAMPQ9BR26 566 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 SSBP3Q9BWW4 388 aaPredicted RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 PCDHAC1Q9H158 963 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 WNT5BQ9H1J7 359 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 ELOVL3Q9HB03 270 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 NOX4Q9NPH5 578 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 MAN2C1Q9NTJ4 1040 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 THAP1Q9NVV9 213 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 STX18Q9P2W9 335 aaKnown RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 SOX21Q9Y651 276 aaPredicted RBP6.86□□□□□ -1.31
USP39-216ENST00000490193 POMT1Q9Y6A1 747 aa6.86□□□□□ -1.31
USP39-216ENST00000490193 IGHV3OR16-10A0A075B7F0 116 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 IGKV1D-43A0A0B4J1Z2 117 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 KIR2DS1A0A191URI9 304 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 A0A1W2PRG6 482 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 TRAPPC13A5PLN9 417 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 GMNCA6NCL1 334 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 MCIDASD6RGH6 385 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 TMEM178BH3BS89 294 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 M0R3H8 397 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 SURF4O15260 269 aa6.85□□□□□ -1.31
USP39-216ENST00000490193 RGS16O15492 202 aaPredicted RBP6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms