RNA–Protein interactions for RNA: ENST00000489794.1

VPS26A-206, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3 BASIC

Gene VPS26A, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-206ENST00000489794 LKAAEAR1Q8TD35 194 aa3.41□□□□□ -1.86
VPS26A-206ENST00000489794 KIFAP3Q92845 792 aa3.41□□□□□ -1.86
VPS26A-206ENST00000489794 ZNF578Q96N58 590 aaPredicted RBP3.41□□□□□ -1.86
VPS26A-206ENST00000489794 GABARAPL3Q9BY60 117 aa3.41□□□□□ -1.86
VPS26A-206ENST00000489794 SLCO1B3Q9NPD5 702 aa3.41□□□□□ -1.86
VPS26A-206ENST00000489794 INPP5EQ9NRR6 644 aa3.41□□□□□ -1.86
VPS26A-206ENST00000489794 RHBDD3Q9Y3P4 386 aa3.41□□□□□ -1.86
VPS26A-206ENST00000489794 CRYGCP07315 174 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 IGFBP3P17936 291 aaPredicted RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 MSR1P21757 451 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 AK4P27144 223 aaPredicted RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 RPS9P46781 194 aaKnown RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 UQCRFS1P47985 274 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 LINC00315P59091 139 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 KCNJ2P63252 427 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 EIF4EBP1Q13541 118 aaPredicted RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 PTGES3Q15185 160 aaKnown RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 TWF2Q6IBS0 349 aaKnown RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 STRADAQ7RTN6 431 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 PQLC3Q8N755 202 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 OR2L8Q8NGY9 312 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 GPX8Q8TED1 209 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 ZFP90Q8TF47 636 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 MED8Q96G25 268 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 BMFQ96LC9 184 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 RARRES2Q99969 163 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 ILKAPQ9H0C8 392 aaPredicted RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 ELOVL6Q9H5J4 265 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 TDRD3Q9H7E2 651 aaKnown RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 C8orf33Q9H7E9 229 aaPredicted RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 LYRM4Q9HD34 91 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 CCNB1IP1Q9NPC3 277 aa3.4□□□□□ -1.87
VPS26A-206ENST00000489794 CENPJQ9HC77 1338 aaPredicted RBP3.4□□□□□ -1.87
VPS26A-206ENST00000489794 TMEM94Q12767 1356 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 IGKV1D-13A0A0B4J2D9 117 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 IGHV3-66A0A0C4DH42 116 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 SMCO2A6NFE2 343 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 ZNF726A6NNF4 738 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 GABRR3A8MPY1 467 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 ZNF701M0R085 212 aaPredicted RBP3.39□□□□□ -1.87
VPS26A-206ENST00000489794 C1orf105O95561 183 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 TGM6O95932 706 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 MBP02144 154 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 ANXA5P08758 320 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 IGKV1-13P0DP09 117 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 SERPINB5P36952 375 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 CYB561P49447 251 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 RAB11AP62491 216 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 TCP10Q12799 353 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 RAB11BQ15907 218 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 RSPO1Q2MKA7 263 aaPredicted RBP3.39□□□□□ -1.87
VPS26A-206ENST00000489794 SASS6Q6UVJ0 657 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 IQCF2Q8IXL9 164 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 SPERTQ8NA61 448 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 B3GNT7Q8NFL0 401 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 PLPPR1Q8TBJ4 325 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 TMEM54Q969K7 222 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 C19orf60Q96EN9 201 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 PARP12Q9H0J9 701 aaKnown RBP3.39□□□□□ -1.87
VPS26A-206ENST00000489794 FBXO44Q9H4M3 255 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 UGT1A7Q9HAW7 530 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 UGT1A10Q9HAW8 530 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 UGT1A8Q9HAW9 530 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 LZTFL1Q9NQ48 299 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 PXMP2Q9NR77 195 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 AGPAT3Q9NRZ7 376 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 NECAP2Q9NVZ3 263 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 MTCH1Q9NZJ7 389 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 NUP50Q9UKX7 468 aa3.39□□□□□ -1.87
VPS26A-206ENST00000489794 F11RQ9Y624 299 aaKnown RBP3.39□□□□□ -1.87
VPS26A-206ENST00000489794 CEMIPQ8WUJ3 1361 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 NDUFS8O00217 210 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 TRDMT1O14717 391 aaKnown RBP3.38□□□□□ -1.87
VPS26A-206ENST00000489794 BET1O15155 118 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 CD5LO43866 347 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 C6orf47O95873 294 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 NPPAP01160 153 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 STAG3L2P0CL84 134 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 CALM1P0DP23 149 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 CALM2P0DP24 149 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 CALM3P0DP25 149 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 U2AF2P26368 475 aaKnown RBP eCLIP3.38□□□□□ -1.87
VPS26A-206ENST00000489794 HMOX2P30519 316 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 SLC7A9P82251 487 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 MRPS22P82650 360 aaKnown RBP3.38□□□□□ -1.87
VPS26A-206ENST00000489794 XIAPP98170 497 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 ITIH4Q14624 930 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 LY6G6FQ5SQ64 297 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 ASCL5Q7RTU5 278 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 VTCN1Q7Z7D3 282 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 MMAAQ8IVH4 418 aaKnown RBP3.38□□□□□ -1.87
VPS26A-206ENST00000489794 RHEBL1Q8TAI7 183 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 TMIGD2Q96BF3 282 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 MRPL37Q9BZE1 423 aaKnown RBP3.38□□□□□ -1.87
VPS26A-206ENST00000489794 NOX3Q9HBY0 568 aa3.38□□□□□ -1.87
VPS26A-206ENST00000489794 MRPS30Q9NP92 439 aaKnown RBP3.38□□□□□ -1.87
VPS26A-206ENST00000489794 GOSR2O14653 212 aa3.37□□□□□ -1.87
VPS26A-206ENST00000489794 POLR3GO15318 223 aaPredicted RBP3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms