RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 TMEM163Q8TC26 289 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 SMAP2Q8WU79 429 aaPredicted RBP9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNRF4Q8WWF5 429 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 FCGR1BQ92637 280 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 PTP4A1Q93096 173 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 OR2M2Q96R28 347 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 BCL7BQ9BQE9 202 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 FAIMQ9NVQ4 179 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 NPAP1Q9NZP6 1156 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 VSX1Q9NZR4 365 aaPredicted RBP9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 LAMP3Q9UQV4 416 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 AMDHD2Q9Y303 409 aa9.23□□□□□ -0.93
SCAMP4-208ENST00000489554 A0A1W2PRG6 482 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC35F4A4IF30 521 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 FAM171A2A8MVW0 826 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SHISA9B4DS77 424 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 M0R3G1 203 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC1A7O00341 560 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 DCTN6O00399 190 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 ABCD4O14678 606 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 AHCYL1O43865 530 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 FAM20BO75063 409 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 TRMUO75648 421 aaKnown RBP9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 KRT33AO76009 404 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 BCL10O95999 233 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 HMGN1P05114 100 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 INHBBP09529 407 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 DANCRP0C864 163 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CLUP10909 449 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 PAX7P23759 505 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 GSTT1P30711 240 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 ACVR1BP36896 505 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SELENOPP49908 381 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 DAP3P51398 398 aaKnown RBP9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CDH11P55287 796 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 FOXG1P55316 489 aaPredicted RBP9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CLDN17P56750 224 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 LGALS3BPQ08380 585 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SNAPC1Q16533 368 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SMN1Q16637 294 aaKnown RBP9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CNPY1Q3B7I2 92 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 KLHL24Q6TFL4 600 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 LINGO2Q7L985 606 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 TCEANCQ8N8B7 351 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CYB561A3Q8NBI2 242 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF540Q8NDQ6 660 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 BPIFB6Q8NFQ5 453 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 OR52E2Q8NGJ4 325 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 OR8J1Q8NGP2 316 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CNIH3Q8TBE1 160 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 TMEM54Q969K7 222 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 TRMT61AQ96FX7 289 aaKnown RBP9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 BOD1Q96IK1 185 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 Q96MF0 132 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SNX18Q96RF0 628 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 IL4I1Q96RQ9 567 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 NMNAT3Q96T66 252 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 YIPF3Q9GZM5 350 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 FN3KQ9H479 309 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 DUSP21Q9H596 190 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 MED20Q9H944 212 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 SLC17A5Q9NRA2 495 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CLN6Q9NWW5 311 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 CISD1Q9NZ45 108 aaKnown RBP9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 KLHL21Q9UJP4 597 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 RCE1Q9Y256 329 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 ROS1P08922 2347 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 C2CD3Q4AC94 2353 aa9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 ZNF469Q96JG9 3925 aaPredicted RBP9.22□□□□□ -0.93
SCAMP4-208ENST00000489554 DSCAMO60469 2012 aa9.21□□□□□ -0.93
SCAMP4-208ENST00000489554 IGLV1-36A0A0B4J1U3 117 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 IRGMA1A4Y4 181 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 SLC22A23A1A5C7 686 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 PRSS37A4D1T9 235 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 CCDC182A6NF36 153 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 EFCAB10A6NFE3 127 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 FAM183AA6NL82 134 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 ZNF587BE7ETH6 402 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 OVOL3O00110 214 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 RGS10O43665 173 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 TLX2O43763 284 aaPredicted RBP9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 WNT11O96014 354 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 SOD3P08294 240 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 CD40P25942 277 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 ZNF83P51522 516 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 ZNF133P52736 654 aaPredicted RBP9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 TMBIM6P55061 237 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 ATP5J2P56134 94 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 FMODQ06828 376 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 DYNC1I2Q13409 638 aaKnown RBP9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 CAMK2DQ13557 499 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 C1DQ13901 141 aaKnown RBP9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 ETFDHQ16134 617 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 OCLNQ16625 522 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 LINC01590Q5TEZ4 76 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 C9orf135Q5VTT2 229 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 MEDAGQ5VYS4 303 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 FAM205BPQ63HN1 556 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 NIPAL3Q6P499 406 aa9.21□□□□□ -0.94
SCAMP4-208ENST00000489554 LEG1Q6P5S2 330 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms