RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 DPPA2Q7Z7J5 298 aa12.5□□□□□ -0.41
HLA-F-229ENST00000489502 SLC26A10Q8NG04 563 aa12.5□□□□□ -0.41
HLA-F-229ENST00000489502 OR2T4Q8NH00 348 aa12.5□□□□□ -0.41
HLA-F-229ENST00000489502 RBM4BQ9BQ04 359 aaKnown RBP12.5□□□□□ -0.41
HLA-F-229ENST00000489502 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
HLA-F-229ENST00000489502 OR2H1Q9GZK4 316 aa12.5□□□□□ -0.41
HLA-F-229ENST00000489502 KCNN2Q9H2S1 579 aa12.5□□□□□ -0.41
HLA-F-229ENST00000489502 ATP23Q9Y6H3 246 aa12.5□□□□□ -0.41
HLA-F-229ENST00000489502 MYO9AB2RTY4 2548 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 TVP23AA6NH52 213 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 E7EQL1 145 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 HLA-DQA2P01906 255 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 CRYAAP02489 173 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 TFP02787 698 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 ALPLP05186 524 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 APEX1P27695 318 aaKnown RBP12.49□□□□□ -0.41
HLA-F-229ENST00000489502 POLR2IP36954 125 aaKnown RBP12.49□□□□□ -0.41
HLA-F-229ENST00000489502 SLC25A1P53007 311 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 PSG4Q00888 419 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 GLO1Q04760 184 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 PTGES3Q15185 160 aaKnown RBP12.49□□□□□ -0.41
HLA-F-229ENST00000489502 ZNF774Q6NX45 483 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 PLBD1Q6P4A8 553 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 LINC00346Q8IVM7 164 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 PAQR4Q8N4S7 273 aaPredicted RBP12.49□□□□□ -0.41
HLA-F-229ENST00000489502 SLC30A7Q8NEW0 376 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 BBS1Q8NFJ9 593 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 OR10H5Q8NGA6 315 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 OR6K6Q8NGW6 343 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 FBXW5Q969U6 566 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 PLEKHA8Q96JA3 519 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 GABARAPL3Q9BY60 117 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 WNT5BQ9H1J7 359 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 HINT3Q9NQE9 182 aaKnown RBP12.49□□□□□ -0.41
HLA-F-229ENST00000489502 MRPL22Q9NWU5 206 aaKnown RBP12.49□□□□□ -0.41
HLA-F-229ENST00000489502 TVP23BQ9NYZ1 205 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 USE1Q9NZ43 259 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 ASH2LQ9UBL3 628 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 ST6GALNAC2Q9UJ37 374 aa12.49□□□□□ -0.41
HLA-F-229ENST00000489502 ZAR1LA6NP61 321 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 C12orf71A8MTZ7 269 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 DOK2O60496 412 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 HMGN1P05114 100 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 SERPINA5P05154 406 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 PSKH1P11801 424 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 ANPEPP15144 967 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 PAICSP22234 425 aaKnown RBP12.48□□□□□ -0.41
HLA-F-229ENST00000489502 PAX7P23759 505 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 RPS27P42677 84 aaKnown RBP12.48□□□□□ -0.41
HLA-F-229ENST00000489502 ALDH3A2P51648 485 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 ELF3P78545 371 aaPredicted RBP12.48□□□□□ -0.41
HLA-F-229ENST00000489502 TEKQ02763 1124 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 HGFACQ04756 655 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 SNTB2Q13425 540 aaKnown RBP12.48□□□□□ -0.41
HLA-F-229ENST00000489502 AQP6Q13520 282 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 SNAPC1Q16533 368 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 SLX4IPQ5VYV7 408 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 KRT80Q6KB66 452 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 CORO6Q6QEF8 472 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 VHLLQ6RSH7 139 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 DEPDC4Q8N2C3 294 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 CPEB3Q8NE35 698 aaKnown RBP12.48□□□□□ -0.41
HLA-F-229ENST00000489502 SLC29A1Q99808 456 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 C9orf16Q9BUW7 83 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 OR51V1Q9H2C8 321 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 OR51B6Q9H340 312 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 ENOPH1Q9UHY7 261 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 FBXL3Q9UKT7 428 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 LHFPL6Q9Y693 200 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 COMMD3-BMI1R4GMX3 469 aa12.48□□□□□ -0.41
HLA-F-229ENST00000489502 USF3Q68DE3 2245 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 IQCMA0A1B0GVH7 501 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 PRR23D1E9PI22 279 aaPredicted RBP12.47□□□□□ -0.41
HLA-F-229ENST00000489502 PRKYO43930 277 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 ATE1O95260 518 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 RAF1P04049 648 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 PRR23D2P0DMB1 279 aaPredicted RBP12.47□□□□□ -0.41
HLA-F-229ENST00000489502 PEX2P28328 305 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 PCBD1P61457 104 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 LSM6P62312 80 aaKnown RBP12.47□□□□□ -0.41
HLA-F-229ENST00000489502 PLP2Q04941 152 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 SCRN3Q0VDG4 424 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 TRIP10Q15642 601 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 KCNMB1Q16558 191 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 ZIK1Q3SY52 487 aaPredicted RBP12.47□□□□□ -0.41
HLA-F-229ENST00000489502 C12orf73Q69YU5 71 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 C20orf204Q6ZNR8 217 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 CXXC5Q7LFL8 322 aaKnown RBP12.47□□□□□ -0.41
HLA-F-229ENST00000489502 CPOQ8IVL8 374 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 ZNF611Q8N823 705 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 EME1Q96AY2 570 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 CCL19Q99731 98 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 TEX12Q9BXU0 123 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 CDH20Q9HBT6 801 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 CISD1Q9NZ45 108 aaKnown RBP12.47□□□□□ -0.41
HLA-F-229ENST00000489502 TIMM10BQ9Y5J6 103 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 ORC6Q9Y5N6 252 aa12.47□□□□□ -0.41
HLA-F-229ENST00000489502 RER1O15258 196 aa12.46□□□□□ -0.41
HLA-F-229ENST00000489502 SGCEO43556 437 aa12.46□□□□□ -0.41
HLA-F-229ENST00000489502 GPRIN2O60269 458 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms