RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 CD63P08962 238 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 TRAPPC2P0DI81 140 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 TRAPPC2BP0DI82 140 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 IRS1P35568 1242 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 NPBWR1P48145 328 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF133P52736 654 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-209ENST00000489180 DCBLD2Q96PD2 775 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 UBL7Q96S82 380 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-209ENST00000489180 KCNJ15Q99712 375 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 HIPK2Q9H2X6 1198 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 AUNIPQ9H7T9 357 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 SLC10A1Q14973 349 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 HSF5Q4G112 596 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-209ENST00000489180 PYCR3Q53H96 274 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 ADAM5Q6NVV9 412 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 GABRG1Q8N1C3 465 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 PRSS35Q8N3Z0 413 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 RELL2Q8NC24 303 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-209ENST00000489180 OR10Z1Q8NGY1 313 aa16.1■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF816-ZNF321PA0A0X1KG74 233 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 OR5K3A6NET4 321 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 EIF1BO60739 113 aaKnown RBP16.09■□□□□ 0.17
NPHP4-209ENST00000489180 ALOX12BO75342 701 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF321PQ8N8H1 164 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 EMG1Q92979 244 aaKnown RBP16.09■□□□□ 0.17
NPHP4-209ENST00000489180 RAB39BQ96DA2 213 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 CSF3RQ99062 836 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 ACHEP22303 614 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 P2RX1P51575 399 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 TAGLNQ01995 201 aaKnown RBP16.09■□□□□ 0.17
NPHP4-209ENST00000489180 BAK1Q16611 211 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 SLC43A2Q8N370 569 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 SEMA6DQ8NFY4 1073 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 OR51A2Q8NGJ7 313 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 MICAL3Q7RTP6 2002 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 KLK8O60259 260 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 RAB11AP62491 216 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 PDZK1IP1Q13113 114 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 PARM1Q6UWI2 310 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 RABEPKQ7Z6M1 372 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 OR5AS1Q8N127 324 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 OR1M1Q8NGA1 313 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 PLSCR3Q9NRY6 295 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 SCO1O75880 301 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 SSTP61278 116 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 OR8B8Q15620 311 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 CST9Q5W186 159 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 TCTN3Q6NUS6 607 aa16.09■□□□□ 0.17
NPHP4-209ENST00000489180 IGHV3-64DA0A0J9YX35 117 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 SDCBPO00560 298 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-209ENST00000489180 EIF1P41567 113 aaKnown RBP16.08■□□□□ 0.17
NPHP4-209ENST00000489180 ADPRHP54922 357 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF77Q15935 545 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 SPPL3Q8TCT6 385 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 ZNF2Q9BSG1 426 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-209ENST00000489180 PRRT4C9JH25 899 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 NRG2O14511 850 aaPredicted RBP16.08■□□□□ 0.17
NPHP4-209ENST00000489180 PI3P19957 117 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 HSF1Q00613 529 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 CYHR1Q6ZMK1 362 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 OR2L13Q8N349 312 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 TMED6Q8WW62 240 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 ADAM19Q9H013 955 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 B3GALT5Q9Y2C3 310 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 HRH3Q9Y5N1 445 aa16.08■□□□□ 0.17
NPHP4-209ENST00000489180 A0A1B0GX78 115 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 SNRPNP63162 240 aaKnown RBP16.08■□□□□ 0.16
NPHP4-209ENST00000489180 ACKR1Q16570 336 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 PRSS36Q5K4E3 855 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 AKIP1Q9NQ31 210 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 HEYLQ9NQ87 328 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-209ENST00000489180 PSMB3P49720 205 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 BTG2P78543 158 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 SLAMF6Q96DU3 332 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 PIGMQ9H3S5 423 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 ING1Q9UK53 422 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-209ENST00000489180 RAB19A4D1S5 217 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 RAF1P04049 648 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 THBS3P49746 956 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 KIAA0141Q14154 515 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-209ENST00000489180 FCRL6Q6DN72 434 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 IL34Q6ZMJ4 242 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 ST8SIA4Q92187 359 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 ZNF75AQ96N20 296 aa16.08■□□□□ 0.16
NPHP4-209ENST00000489180 C6orf106Q9H6K1 298 aaPredicted RBP16.08■□□□□ 0.16
NPHP4-209ENST00000489180 SDK1Q7Z5N4 2213 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-209ENST00000489180 LGALS8O00214 317 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 THBS1P07996 1170 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 SDHAP31040 664 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 RPL34P49207 117 aaKnown RBP16.07■□□□□ 0.16
NPHP4-209ENST00000489180 EMDP50402 254 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 OR11L1Q8NGX0 322 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 KIRREL1Q96J84 757 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 A0A1B0GUL6 1792 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 FXYD1O00168 92 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 GLSO94925 669 aaPredicted RBP16.07■□□□□ 0.16
NPHP4-209ENST00000489180 IGLV3-25P01717 112 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 TLE1Q04724 770 aa16.07■□□□□ 0.16
NPHP4-209ENST00000489180 AGERQ15109 404 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms