RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 ALDH16A1Q8IZ83 802 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 CLDND2Q8NHS1 167 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 C7orf34Q96L11 122 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 ZNF570Q96NI8 536 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 NDEL1Q9GZM8 345 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 POLE4Q9NR33 117 aa19.64■□□□□ 0.73
COL9A3-213ENST00000489045 XKRYO14609 159 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 PPIHO43447 177 aaKnown RBP19.63■□□□□ 0.73
COL9A3-213ENST00000489045 DIRAS1O95057 198 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 SCG5P05408 212 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 RHCEP18577 417 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 MPV17P39210 176 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 LIMS1P48059 325 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 TMEM33P57088 247 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 MOGQ16653 247 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 PCGF3Q3KNV8 242 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 ZNF718Q3SXZ3 478 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 UGT2A3Q6UWM9 527 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 RFPL4BQ6ZWI9 263 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 PHC2Q8IXK0 858 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 IPCEF1Q8WWN9 437 aaPredicted RBP19.63■□□□□ 0.73
COL9A3-213ENST00000489045 TMEM158Q8WZ71 300 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 RASD2Q96D21 266 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 RACGAP1Q9H0H5 632 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 EMC7Q9NPA0 242 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 NKIRAS2Q9NYR9 191 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 SIGLEC7Q9Y286 467 aa19.63■□□□□ 0.73
COL9A3-213ENST00000489045 TRBV4-1A0A0J9YWV2 114 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 C12orf71A8MTZ7 269 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 WNT9BO14905 357 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 CDC14BO60729 498 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 GMNNO75496 209 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 NDUFB2O95178 105 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 MT-ND5P03915 603 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 GCH1P30793 250 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 KRR1Q13601 381 aaKnown RBP19.62■□□□□ 0.73
COL9A3-213ENST00000489045 TMEM255AQ5JRV8 349 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 UNQ6126/PRO20091Q6UXV3 157 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 CPLX4Q7Z7G2 160 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 ABHD4Q8TB40 342 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 SLC25A40Q8TBP6 338 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 MARS2Q96GW9 593 aaKnown RBP19.62■□□□□ 0.73
COL9A3-213ENST00000489045 V9GYQ6 96 aa19.62■□□□□ 0.73
COL9A3-213ENST00000489045 TEX13CA0A0J9YWL9 993 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 PRSS37A4D1T9 235 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 AHCYL1O43865 530 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 OMPP47874 163 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 SEC23BQ15437 767 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 SYT9Q86SS6 491 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 RSRC1Q96IZ7 334 aaKnown RBP19.61■□□□□ 0.73
COL9A3-213ENST00000489045 OR2J1Q9GZK6 312 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 GORASP2Q9H8Y8 452 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 TMEFF2Q9UIK5 374 aaPredicted RBP19.61■□□□□ 0.73
COL9A3-213ENST00000489045 TANC2Q9HCD6 1990 aa19.61■□□□□ 0.73
COL9A3-213ENST00000489045 TPD52L2O43399 206 aaKnown RBP19.6■□□□□ 0.73
COL9A3-213ENST00000489045 ICMTO60725 284 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 PTP4A3O75365 173 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 NGFP01138 241 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 CTLA4P16410 223 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 SDHAP31040 664 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 THBS2P35442 1172 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 ZNF81P51508 661 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 PPP1CBP62140 327 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 KRT72Q14CN4 511 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 TSTQ16762 297 aaKnown RBP19.6■□□□□ 0.73
COL9A3-213ENST00000489045 MBNL2Q5VZF2 373 aaKnown RBP19.6■□□□□ 0.73
COL9A3-213ENST00000489045 THSD4Q6ZMP0 1018 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 OR52J3Q8NH60 311 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 KLF14Q8TD94 323 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-213ENST00000489045 DHRS1Q96LJ7 313 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 GPX7Q96SL4 187 aaPredicted RBP19.6■□□□□ 0.73
COL9A3-213ENST00000489045 NRIP3Q9NQ35 241 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 DECR2Q9NUI1 292 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 TREM2Q9NZC2 230 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 IL20RAQ9UHF4 553 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 AURKCQ9UQB9 309 aa19.6■□□□□ 0.73
COL9A3-213ENST00000489045 IGHV1-69-2A0A0G2JMI3 117 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 B4DSR2 109 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 FAM157AC9JC47 383 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 TFP02787 698 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 CRYBB2P43320 205 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 MMP15P51511 669 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 DVL1P1P54792 670 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-213ENST00000489045 FXYD6P3P58550 94 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 GPR139Q6DWJ6 353 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 USP51Q70EK9 711 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 C1orf174Q8IYL3 243 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 C4orf45Q96LM5 186 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 FUZQ9BT04 418 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 WACQ9BTA9 647 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 SYT4Q9H2B2 425 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 SAP30LQ9HAJ7 183 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 ELOVL3Q9HB03 270 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 KRCC1Q9NPI7 259 aaPredicted RBP19.59■□□□□ 0.73
COL9A3-213ENST00000489045 MAGEL2Q9UJ55 1249 aa19.59■□□□□ 0.73
COL9A3-213ENST00000489045 NDRG4Q9ULP0 352 aaKnown RBP19.59■□□□□ 0.73
COL9A3-213ENST00000489045 UNC119BA6NIH7 251 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 SOCS2O14508 198 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 IMPA2O14732 288 aa19.58■□□□□ 0.72
COL9A3-213ENST00000489045 SPRY3O43610 288 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms