RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 ETV1P50549 477 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 HCCSP53701 268 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 HIST1H3AP68431 136 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 GALEQ14376 348 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 P2RY6Q15077 328 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 SGCAQ16586 387 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 HIST2H3PS2Q5TEC6 136 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 SLC18B1Q6NT16 456 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF474Q6S9Z5 364 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF813Q6ZN06 617 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 HIST2H3AQ71DI3 136 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 MRGPRGQ86SM5 289 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 SYT9Q86SS6 491 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 SVOPQ8N4V2 548 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF433Q8N7K0 673 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 NANOGP1Q8N7R0 232 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 RELL2Q8NC24 303 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 C1orf162Q8NEQ5 155 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 ST7LQ8TDW4 575 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 SMAP2Q8WU79 429 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 BCL2L2Q92843 193 aaPredicted RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF416Q9BWM5 594 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 MRPS26Q9BYN8 205 aaKnown RBP14.05□□□□□ -0.16
CLDN11-208ENST00000488989 CCDC90BQ9GZT6 254 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 CLEC2DQ9UHP7 191 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 SNX5Q9Y5X3 404 aa14.05□□□□□ -0.16
CLDN11-208ENST00000488989 DAPL1A0PJW8 107 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 DVL2O14641 736 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 PRB1P04280 392 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 SPARCP09486 303 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 HOXB1P14653 301 aaPredicted RBP14.04□□□□□ -0.16
CLDN11-208ENST00000488989 B4GALT1P15291 398 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 RPS27P42677 84 aaKnown RBP14.04□□□□□ -0.16
CLDN11-208ENST00000488989 TGFBR3Q03167 851 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 EMX1Q04741 257 aaPredicted RBP14.04□□□□□ -0.16
CLDN11-208ENST00000488989 AQP6Q13520 282 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 CDONQ4KMG0 1287 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF684Q5T5D7 378 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 OTPQ5XKR4 325 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 ANKRD16Q6P6B7 361 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 KLHL24Q6TFL4 600 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 SSX6Q7RTT6 188 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 LHFPL3Q86UP9 236 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 LIX1LQ8IVB5 337 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 RFLNBQ8N5W9 214 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF485Q8NCK3 441 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 OR52N1Q8NH53 320 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 HTRA1Q92743 480 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 ACOT13Q9NPJ3 140 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 CHCHD3Q9NX63 227 aaKnown RBP14.04□□□□□ -0.16
CLDN11-208ENST00000488989 LAMP5Q9UJQ1 280 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 ERGIC3Q9Y282 383 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 KLHDC2Q9Y2U9 406 aa14.04□□□□□ -0.16
CLDN11-208ENST00000488989 LSM2Q9Y333 95 aaKnown RBP14.04□□□□□ -0.16
CLDN11-208ENST00000488989 CAB39Q9Y376 341 aaPredicted RBP14.04□□□□□ -0.16
CLDN11-208ENST00000488989 SMG1Q96Q15 3661 aaKnown RBP14.04□□□□□ -0.16
CLDN11-208ENST00000488989 SEC14L2O76054 403 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 FARS2O95363 451 aaKnown RBP14.03□□□□□ -0.16
CLDN11-208ENST00000488989 MMP7P09237 267 aaPredicted RBP14.03□□□□□ -0.16
CLDN11-208ENST00000488989 JUNBP17275 347 aaPredicted RBP14.03□□□□□ -0.16
CLDN11-208ENST00000488989 BMP5P22003 454 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 GNLYP22749 145 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 ADORA2A-AS1P86434 159 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 EGR3Q06889 387 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 IGFBP7Q16270 282 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 GABRA6Q16445 453 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 C4orf17Q53FE4 359 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 C9orf135Q5VTT2 229 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 XAF1Q6GPH4 301 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 MTFR2Q6P444 385 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 RHOUQ7L0Q8 258 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.03□□□□□ -0.16
CLDN11-208ENST00000488989 SKA3Q8IX90 412 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 SYS1Q8N2H4 156 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 ASB17Q8WXJ9 295 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 MRPL48Q96GC5 212 aaKnown RBP14.03□□□□□ -0.16
CLDN11-208ENST00000488989 MYCBPQ99417 103 aaPredicted RBP14.03□□□□□ -0.16
CLDN11-208ENST00000488989 TBX5Q99593 518 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 ABHD6Q9BV23 337 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 ALG8Q9BVK2 526 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 CDADC1Q9BWV3 514 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 C1orf198Q9H425 327 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 ZNF224Q9NZL3 707 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 ASH2LQ9UBL3 628 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 GDF2Q9UK05 429 aaPredicted RBP14.03□□□□□ -0.16
CLDN11-208ENST00000488989 RTTNQ86VV8 2226 aa14.03□□□□□ -0.16
CLDN11-208ENST00000488989 PRR32B1ATL7 298 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 PTHP01270 115 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 ATP6V1B1P15313 513 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 PSMB1P20618 241 aaKnown RBP14.02□□□□□ -0.17
CLDN11-208ENST00000488989 MAP2K4P45985 399 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 UQCRFS1P47985 274 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 PCBD1P61457 104 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 ACTA2P62736 377 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 ACTG2P63267 376 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 ROM1Q03395 351 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 EIF2B1Q14232 305 aaKnown RBP14.02□□□□□ -0.17
CLDN11-208ENST00000488989 SFRP5Q5T4F7 317 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 UBE2UQ5VVX9 321 aa14.02□□□□□ -0.17
CLDN11-208ENST00000488989 DEGS2Q6QHC5 323 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms