RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 LINC00471Q8N535 108 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 C10orf105Q8TEF2 133 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 LRGUKQ96M69 825 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 VRK1Q99986 396 aaPredicted RBP13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 SYT3Q9BQG1 590 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 EGLN3Q9H6Z9 239 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 IL20Q9NYY1 176 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 FZR1Q9UM11 496 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 U3KQV3 271 aa13.7□□□□□ -0.22
CTDSP1-209ENST00000488627 ZANQ9Y493 2812 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 C12orf71A8MTZ7 269 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 BHLHE40O14503 412 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 GSC2O15499 205 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 IDH3BO43837 385 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 DNAJC8O75937 253 aaPredicted RBP13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 CCNB2O95067 398 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 ADRA2AP08913 450 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 ZNF250P15622 560 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 APLNRP35414 380 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 WNT5AP41221 380 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 PCBD1P61457 104 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 KCNMB1Q16558 191 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 MICAQ29983 383 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 ZNF774Q6NX45 483 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 RASSF6Q6ZTQ3 369 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 GLB1L2Q8IW92 636 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 OR6V1Q8N148 313 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 OR8D4Q8NGM9 314 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 OR4K13Q8NH42 304 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 FAM168AQ92567 244 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 SNX18Q96RF0 628 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 NMNAT3Q96T66 252 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 DDOQ99489 341 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 WACQ9BTA9 647 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 IFT27Q9BW83 186 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 CADM1Q9BY67 442 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 PLA2G12AQ9BZM1 189 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 RAB1BQ9H0U4 201 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 LRMDAQ9H2I8 198 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 B9D1Q9UPM9 204 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 POMPQ9Y244 141 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 SAMHD1Q9Y3Z3 626 aaKnown RBP13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 CDH10Q9Y6N8 788 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 C2CD3Q4AC94 2353 aa13.69□□□□□ -0.22
CTDSP1-209ENST00000488627 IGLV3-9A0A075B6K5 115 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 IGLV1-36A0A0B4J1U3 117 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 DHRS12A0PJE2 317 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 C5orf49A4QMS7 147 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 VWC2LB2RUY7 222 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 SYNGR3O43761 229 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 ICMTO60725 284 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 GPANK1O95872 356 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 CLPTM1O96005 669 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 TP53P04637 393 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 RAD52P43351 418 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 ALDH3B1P43353 468 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 LSM6P62312 80 aaKnown RBP13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 RGS7BPQ6MZT1 257 aaPredicted RBP13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 LEG1Q6P5S2 330 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 ZNF101Q8IZC7 436 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 AQP11Q8NBQ7 271 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 NPEPL1Q8NDH3 523 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 C11orf40Q8WZ69 217 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 DGCR6LQ9BY27 220 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 BCL2L14Q9BZR8 327 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 OR51B6Q9H340 312 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 RERGLQ9H628 205 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 REEP1Q9H902 201 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 REV1Q9UBZ9 1251 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 FKBP7Q9Y680 259 aa13.68□□□□□ -0.22
CTDSP1-209ENST00000488627 NF1P21359 2839 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 TCRBV3S1A0A5B6 114 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 OR6C68A6NDL8 312 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 STAMBPO95630 424 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 CSF3P09919 207 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 GAAP10253 952 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 COX5BP10606 129 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 HOXB4P17483 251 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 CCNOP22674 350 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 CRABP1P29762 137 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 GDI2P50395 445 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 MAD2L1BPQ15013 274 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 CLEC12AQ5QGZ9 265 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 SLC35F1Q5T1Q4 408 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 TMEM179BQ7Z7N9 219 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 ZBTB46Q86UZ6 589 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 ALDH16A1Q8IZ83 802 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 PAPD5Q8NDF8 572 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 NEU4Q8WWR8 484 aaPredicted RBP13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 SRA1Q9HD15 236 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 DUSP13Q9UII6 198 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 TLN2Q9Y4G6 2542 aa13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 FN1P02751 2386 aaKnown RBP13.67□□□□□ -0.22
CTDSP1-209ENST00000488627 M0R233 179 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 CST1P01037 141 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 NGFP01138 241 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 TFP02787 698 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 LCKP06239 509 aa13.66□□□□□ -0.22
CTDSP1-209ENST00000488627 SLC25A16P16260 332 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms