RNA–Protein interactions for RNA: ENST00000487266.1

GABPA-203, Transcript of GA binding protein transcription factor subunit alpha, humanhuman

TSL 2

Gene GABPA, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPA-203ENST00000487266 OR52D1Q9H346 318 aa13.58□□□□□ -0.24
GABPA-203ENST00000487266 MYOZ1Q9NP98 299 aaPredicted RBP13.58□□□□□ -0.24
GABPA-203ENST00000487266 IL1RAPQ9NPH3 570 aa13.58□□□□□ -0.24
GABPA-203ENST00000487266 TAAR3PQ9P1P4 343 aa13.58□□□□□ -0.24
GABPA-203ENST00000487266 IGLV3-9A0A075B6K5 115 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 KIAA1324LA8MWY0 1029 aaPredicted RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 DCTN6O00399 190 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 SLC16A7O60669 478 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 CRLF1O75462 422 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 PTHP01270 115 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 ERCC1P07992 297 aaPredicted RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 IL2RGP31785 369 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 MPV17P39210 176 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 CDKN2AP42771 156 aaKnown RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 MAGEB1P43366 347 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 EVX1P49640 407 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 GDI2P50395 445 aaKnown RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 MS4A2Q01362 244 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 PPP1R8Q12972 351 aaKnown RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 NKPD1Q17RQ9 610 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 ELFN2Q5R3F8 820 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 SMARCD3Q6STE5 483 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 OR9Q2Q8NGE9 314 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 OR1J2Q8NGS2 313 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 SYNPRQ8TBG9 265 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 UBASH3BQ8TF42 649 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 CCDC124Q96CT7 223 aaKnown RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 NDEL1Q9GZM8 345 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 NUAK2Q9H093 628 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 KRCC1Q9NPI7 259 aaPredicted RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 VSX1Q9NZR4 365 aaPredicted RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 ACTR3BQ9P1U1 418 aa13.57□□□□□ -0.24
GABPA-203ENST00000487266 COA3Q9Y2R0 106 aaPredicted RBP13.57□□□□□ -0.24
GABPA-203ENST00000487266 A8MV72 311 aaPredicted RBP13.56□□□□□ -0.24
GABPA-203ENST00000487266 TLX2O43763 284 aaPredicted RBP13.56□□□□□ -0.24
GABPA-203ENST00000487266 DOK2O60496 412 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 NGFP01138 241 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 APEHP13798 732 aaKnown RBP13.56□□□□□ -0.24
GABPA-203ENST00000487266 ZNF250P15622 560 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 CALB2P22676 271 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 FPR3P25089 353 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 KLF3P57682 345 aaPredicted RBP13.56□□□□□ -0.24
GABPA-203ENST00000487266 MEP1BQ16820 701 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 GPR139Q6DWJ6 353 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 PGBD2Q6P3X8 592 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 DPY19L2P2Q6ZN68 376 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 ZNF786Q8N393 782 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 ABHD4Q8TB40 342 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 IPCEF1Q8WWN9 437 aaPredicted RBP13.56□□□□□ -0.24
GABPA-203ENST00000487266 SLC7A6Q92536 515 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 YIPF5Q969M3 257 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 SAMD8Q96LT4 415 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 ERMAPQ96PL5 475 aaPredicted RBP13.56□□□□□ -0.24
GABPA-203ENST00000487266 BTBD10Q9BSF8 475 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 BCL2L14Q9BZR8 327 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 LRMDAQ9H2I8 198 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 FN3KQ9H479 309 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 EGLN3Q9H6Z9 239 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 VNN3Q9NY84 501 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 FAM53CQ9NYF3 392 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 FBXO9Q9UK97 447 aaPredicted RBP13.56□□□□□ -0.24
GABPA-203ENST00000487266 TIMM10BQ9Y5J6 103 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 LYVE1Q9Y5Y7 322 aa13.56□□□□□ -0.24
GABPA-203ENST00000487266 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.56□□□□□ -0.24
GABPA-203ENST00000487266 DNHD1Q96M86 4753 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 KHDRBS3O75525 346 aaKnown RBP13.55□□□□□ -0.24
GABPA-203ENST00000487266 TXNDC12O95881 172 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 COL8A2P25067 703 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 GIFP27352 417 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 GUCA1AP43080 201 aaPredicted RBP13.55□□□□□ -0.24
GABPA-203ENST00000487266 RAD52P43351 418 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 RPS6KA3P51812 740 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 MNAT1P51948 309 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 SMIM11AP58511 58 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 HNRNPA0Q13151 305 aaKnown RBP13.55□□□□□ -0.24
GABPA-203ENST00000487266 RIN1Q13671 783 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 RFX4Q33E94 735 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 SPATS1Q496A3 300 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 LCN8Q6JVE9 175 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 LEG1Q6P5S2 330 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 ZNF620Q6ZNG0 422 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 ADCK1Q86TW2 530 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 SLC25A40Q8TBP6 338 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 C11orf40Q8WZ69 217 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 SNX18Q96RF0 628 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 NMNAT3Q96T66 252 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 IFT27Q9BW83 186 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 OR2J1Q9GZK6 312 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 MS4A5Q9H3V2 200 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 POFUT1Q9H488 388 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 NARFLQ9H6Q4 476 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 TMCC3Q9ULS5 477 aa13.55□□□□□ -0.24
GABPA-203ENST00000487266 C12orf71A8MTZ7 269 aa13.54□□□□□ -0.24
GABPA-203ENST00000487266 LILRA1O75019 489 aa13.54□□□□□ -0.24
GABPA-203ENST00000487266 HIST1H1CP16403 213 aaKnown RBP13.54□□□□□ -0.24
GABPA-203ENST00000487266 ZNF23P17027 643 aa13.54□□□□□ -0.24
GABPA-203ENST00000487266 SLC6A6P31641 620 aa13.54□□□□□ -0.24
GABPA-203ENST00000487266 MAGEA2P43356 314 aa13.54□□□□□ -0.24
GABPA-203ENST00000487266 HTR5AP47898 357 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms