RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 OR6V1Q8N148 313 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 SLC37A3Q8NCC5 494 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 SLC26A10Q8NG04 563 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 OR4Q3Q8NH05 313 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 FBXO17Q96EF6 278 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 MS4A3Q96HJ5 214 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 ZNF75AQ96N20 296 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 ZNF416Q9BWM5 594 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 CDADC1Q9BWV3 514 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 GSX2Q9BZM3 304 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 BCL2L14Q9BZR8 327 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 HDHD2Q9H0R4 259 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 LIME1Q9H400 295 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 BARX1Q9HBU1 254 aaPredicted RBP12.69□□□□□ -0.38
LIMS3-205ENST00000487150 OAZ3Q9UMX2 235 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 LAMP3Q9UQV4 416 aa12.69□□□□□ -0.38
LIMS3-205ENST00000487150 OR6C68A6NDL8 312 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 J3QW42 95 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 SGCEO43556 437 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 DOK2O60496 412 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 TP53P04637 393 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-205ENST00000487150 ERCC1P07992 297 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-205ENST00000487150 PATE4P0C8F1 98 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 GAAP10253 952 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 ZNF35P13682 527 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 PAX1P15863 534 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 ZNF823P16415 610 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 NR4A1P22736 598 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 CALCRP30988 508 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 SERPINF1P36955 418 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 ART1P52961 327 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 SELENOVP59797 346 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 GINS1Q14691 196 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 EFNB3Q15768 340 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 KDM4DQ6B0I6 523 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 ICA1LQ8NDH6 482 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 GJC3Q8NFK1 279 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 OR2AJ1Q8NGZ0 328 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 C11orf40Q8WZ69 217 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 COG8Q96MW5 612 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 TRAF4Q9BUZ4 470 aaPredicted RBP12.68□□□□□ -0.38
LIMS3-205ENST00000487150 CXXC4Q9H2H0 198 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 FN3KQ9H479 309 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 SRA1Q9HD15 236 aaKnown RBP12.68□□□□□ -0.38
LIMS3-205ENST00000487150 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 ASH2LQ9UBL3 628 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 CMAHPQ9Y471 501 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 PMF1-BGLAPU3KQ54 211 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 CACNA1DQ01668 2161 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 ITPR2Q14571 2701 aa12.68□□□□□ -0.38
LIMS3-205ENST00000487150 MAST4O15021 2626 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 B9A039 149 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 PRR23D1E9PI22 279 aaPredicted RBP12.67□□□□□ -0.38
LIMS3-205ENST00000487150 H3BNX3 289 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 H3BSA7 217 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 PRODHO43272 600 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 PRR23D2P0DMB1 279 aaPredicted RBP12.67□□□□□ -0.38
LIMS3-205ENST00000487150 TUBG1P23258 451 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 FMO3P31513 532 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 GLRXP35754 106 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 HTR5AP47898 357 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 DAPP51397 102 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 CRISP1P54107 249 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 NKX6-1P78426 367 aaPredicted RBP12.67□□□□□ -0.38
LIMS3-205ENST00000487150 CDK5Q00535 292 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 PSG4Q00888 419 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 TEKQ02763 1124 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 ECH1Q13011 328 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 RAB35Q15286 201 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 SHEQ5VZ18 495 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 B3GLCTQ6Y288 498 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 MYPOPQ86VE0 399 aaPredicted RBP12.67□□□□□ -0.38
LIMS3-205ENST00000487150 ZNF584Q8IVC4 421 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 PQLC1Q8N2U9 271 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 CYB561A3Q8NBI2 242 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 FGFBP3Q8TAT2 258 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 IGFBPL1Q8WX77 278 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 HTRA1Q92743 480 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 NEUROG1Q92886 237 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 TSSK2Q96PF2 358 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 NMNAT2Q9BZQ4 307 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 SEMA6AQ9H2E6 1030 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 ELOVL3Q9HB03 270 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 S100A14Q9HCY8 104 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 EMC7Q9NPA0 242 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 TUBG2Q9NRH3 451 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 ZNF701Q9NV72 531 aaPredicted RBP12.67□□□□□ -0.38
LIMS3-205ENST00000487150 GPR160Q9UJ42 338 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 SPG11Q96JI7 2443 aa12.67□□□□□ -0.38
LIMS3-205ENST00000487150 C5orf49A4QMS7 147 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 OR6C6A6NF89 314 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 H7C417 338 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 DCTN6O00399 190 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 SURF4O15260 269 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 SOD3P08294 240 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 IGFBP1P08833 259 aaPredicted RBP12.66□□□□□ -0.38
LIMS3-205ENST00000487150 OR4A8P0C604 315 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 SPI1P17947 270 aa12.66□□□□□ -0.38
LIMS3-205ENST00000487150 APEX1P27695 318 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms