RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 CREG2Q8IUH2 290 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 RIMKLAQ8IXN7 391 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 SLC35F6Q8N357 371 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 CCNYL1Q8N7R7 359 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 RBM15BQ8NDT2 890 aaKnown RBP6.73□□□□□ -1.33
XRN1-212ENST00000486211 TRNT1Q96Q11 434 aaKnown RBP6.73□□□□□ -1.33
XRN1-212ENST00000486211 ERP44Q9BS26 406 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 ATAD3AQ9NVI7 634 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 GLTPQ9NZD2 209 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 CTSZQ9UBR2 303 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 PPP2R2CQ9Y2T4 447 aa6.73□□□□□ -1.33
XRN1-212ENST00000486211 LSM4Q9Y4Z0 139 aaKnown RBP6.73□□□□□ -1.33
XRN1-212ENST00000486211 IGKV1D-42A0A075B6H8 117 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 A0A087WUJ7 227 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ZNF726A6NNF4 738 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 H3BQF6 201 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 HMGN4O00479 90 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ENTPD5O75356 428 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 CRCPO75575 148 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 FCN3O75636 299 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 FARS2O95363 451 aaKnown RBP6.72□□□□□ -1.33
XRN1-212ENST00000486211 LHBP01229 141 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 LINC00032P0C843 101 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 IL7RP16871 459 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 NCF2P19878 526 aaPredicted RBP6.72□□□□□ -1.33
XRN1-212ENST00000486211 CBLP22681 906 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 AHCYP23526 432 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ANP32AP39687 249 aaKnown RBP6.72□□□□□ -1.33
XRN1-212ENST00000486211 ARF6P62330 175 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 HPCAP84074 193 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 PLP2Q04941 152 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 GALNTL6Q49A17 601 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 RUNDC3AQ59EK9 446 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 PABPC1L2AQ5JQF8 200 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ZFAND6Q6FIF0 208 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ZDHHC24Q6UX98 284 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ZNF836Q6ZNA1 936 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 DCDC5Q6ZRR9 648 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ZCCHC23Q6ZST2 131 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 SLC16A14Q7RTX9 510 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 SCAIQ8N9R8 606 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 Q8NFD4 153 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ABHD4Q8TB40 342 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 NPRL2Q8WTW4 380 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 C3orf30Q96M34 536 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 ASCL2Q99929 193 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 DUSP26Q9BV47 211 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 DPY30Q9C005 99 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 WNT10AQ9GZT5 417 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 PALMDQ9NP74 551 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 INPP5EQ9NRR6 644 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 FAM53CQ9NYF3 392 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 KLHL14Q9P2G3 628 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 GIMAP2Q9UG22 337 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 CHST2Q9Y4C5 530 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 MAB21L2Q9Y586 359 aa6.72□□□□□ -1.33
XRN1-212ENST00000486211 C5orf49A4QMS7 147 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 H3BUX3 64 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 SURF4O15260 269 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 OR2T1O43869 369 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 DBIP07108 87 aaKnown RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 GSTA1P08263 222 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 KITLGP21583 273 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 PMELP40967 661 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 CRATP43155 626 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 NPY4RP50391 375 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 SERPINB9P50453 376 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 PLTPP55058 493 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 BIDP55957 195 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 COPZ1P61923 177 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 HSF2Q03933 536 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 GNA13Q14344 377 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 HABP2Q14520 560 aaPredicted RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 MAPK11Q15759 364 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 ZNF181Q2M3W8 571 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 KRTAP19-4Q3LI73 84 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 TCTEX1D4Q5JR98 221 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 CD276Q5ZPR3 534 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 METAP1DQ6UB28 335 aaPredicted RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 LRRC74BQ6ZQY2 392 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 VMO1Q7Z5L0 202 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 NET1Q7Z628 596 aaPredicted RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 ZER1Q7Z7L7 766 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 Q8N2B8 174 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 CLIP4Q8N3C7 705 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 PNLDC1Q8NA58 520 aaKnown RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 HIPK4Q8NE63 616 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 SDR9C7Q8NEX9 313 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 VPS37AQ8NEZ2 397 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 CLPTM1LQ96KA5 538 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 TECTBQ96PL2 329 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 ZNF607Q96SK3 696 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 PAFAH2Q99487 392 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 FUT8Q9BYC5 575 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 POFUT1Q9H488 388 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 MTHFD2LQ9H903 347 aaPredicted RBP6.71□□□□□ -1.34
XRN1-212ENST00000486211 ZNF702PQ9H963 129 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 SMURF1Q9HCE7 757 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 MAN2C1Q9NTJ4 1040 aa6.71□□□□□ -1.34
XRN1-212ENST00000486211 C20orf141Q9NUB4 165 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms