RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 EGLN3Q9H6Z9 239 aa10.79□□□□□ -0.68
PTCD1-205ENST00000485746 TBC1D23Q9NUY8 699 aa10.79□□□□□ -0.68
PTCD1-205ENST00000485746 VSX1Q9NZR4 365 aaPredicted RBP10.79□□□□□ -0.68
PTCD1-205ENST00000485746 REV1Q9UBZ9 1251 aa10.79□□□□□ -0.68
PTCD1-205ENST00000485746 GPR160Q9UJ42 338 aa10.79□□□□□ -0.68
PTCD1-205ENST00000485746 TMEM129A0AVI4 362 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 M0R233 179 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 SYNGR3O43761 229 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 E2F6O75461 281 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 LY6HO94772 140 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 SNAP29O95721 258 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 LY6G6DO95868 133 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 HLA-DQA2P01906 255 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 TP53P04637 393 aaPredicted RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 HIST1H1CP16403 213 aaKnown RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 HOXB6P17509 224 aaKnown RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 GSTM3P21266 225 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 GCH1P30793 250 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ALDH3B1P43353 468 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 EVX1P49640 407 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ARHGDIAP52565 204 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 UCP2P55851 309 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 BNIP1Q12981 228 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ENDOGQ14249 297 aaKnown RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 NKPD1Q17RQ9 610 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ALKBH6Q3KRA9 238 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ZNF774Q6NX45 483 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 UGT2A3Q6UWM9 527 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ZNF620Q6ZNG0 422 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 RASSF6Q6ZTQ3 369 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 FOXL2NBQ6ZUU3 175 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 PTCHD4Q6ZW05 846 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 SYT9Q86SS6 491 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ADGRG5Q8IZF4 528 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 PAQR4Q8N4S7 273 aaPredicted RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 OR10H5Q8NGA6 315 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 OR10G2Q8NGC3 310 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 OR52E2Q8NGJ4 325 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 OR4C15Q8NGM1 316 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 OR1J1Q8NGS3 322 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 SYNPRQ8TBG9 265 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 GIPC3Q8TF64 312 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 SNX33Q8WV41 574 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 NEU4Q8WWR8 484 aaPredicted RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 SLC7A6OSQ96CW6 309 aaPredicted RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 NMNAT3Q96T66 252 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 WACQ9BTA9 647 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 CDADC1Q9BWV3 514 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 TSSK6Q9BXA6 273 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 WNT5BQ9H1J7 359 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 TPK1Q9H3S4 243 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 MS4A5Q9H3V2 200 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 ELOVL3Q9HB03 270 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 RPRD1BQ9NQG5 326 aaKnown RBP10.78□□□□□ -0.68
PTCD1-205ENST00000485746 TAAR3PQ9P1P4 343 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 CDH10Q9Y6N8 788 aa10.78□□□□□ -0.68
PTCD1-205ENST00000485746 IGHV4-30-2A0A087WSY4 118 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 ARPC3O15145 178 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 GSC2O15499 205 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 DOK2O60496 412 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 MPZL1O95297 269 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 SCG5P05408 212 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 SLC25A16P16260 332 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 PCSK6P29122 969 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 HTR5AP47898 357 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 ERFP50548 548 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 KLF3P57682 345 aaPredicted RBP10.77□□□□□ -0.69
PTCD1-205ENST00000485746 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.77□□□□□ -0.69
PTCD1-205ENST00000485746 GK3PQ14409 553 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 MOGQ16653 247 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 SLC36A3Q495N2 470 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 OTPQ5XKR4 325 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 PGM2L1Q6PCE3 622 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 LRP11Q86VZ4 500 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 ZCCHC24Q8N2G6 241 aaKnown RBP10.77□□□□□ -0.69
PTCD1-205ENST00000485746 SDR9C7Q8NEX9 313 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 TSSK2Q96PF2 358 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 PIMREGQ9BSJ6 248 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 ZNF556Q9HAH1 456 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 MYOZ1Q9NP98 299 aaPredicted RBP10.77□□□□□ -0.69
PTCD1-205ENST00000485746 VNN3Q9NY84 501 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 PLEK2Q9NYT0 353 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 NDRG4Q9ULP0 352 aaKnown RBP10.77□□□□□ -0.69
PTCD1-205ENST00000485746 B9D1Q9UPM9 204 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 POMPQ9Y244 141 aa10.77□□□□□ -0.69
PTCD1-205ENST00000485746 SGCEO43556 437 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 SOX14O95416 240 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 GPANK1O95872 356 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 MT-ND5P03915 603 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 HEXAP06865 529 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 DAOP14920 347 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 RIPPLY3P57055 190 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 ERVS71-1P61550 626 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 LSM6P62312 80 aaKnown RBP10.76□□□□□ -0.69
PTCD1-205ENST00000485746 CBX1P83916 185 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 AQP6Q13520 282 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 MAD2L1BPQ15013 274 aaPredicted RBP10.76□□□□□ -0.69
PTCD1-205ENST00000485746 ZNF718Q3SXZ3 478 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 SPATA46Q5T0L3 261 aa10.76□□□□□ -0.69
PTCD1-205ENST00000485746 OR2AJ1Q8NGZ0 328 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms