RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 HSMCR30P0CW71 290 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 TMIGD3P0DMS9 266 aaPredicted RBP18■□□□□ 0.47
VCPKMT-203ENST00000484763 TTKP33981 857 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 CAPZA2P47755 286 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 EGR3Q06889 387 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 FAPQ12884 760 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 FOXF2Q12947 444 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 LINC00346Q8IVM7 164 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 C4orf36Q96KX1 117 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 ISG20L2Q9H9L3 353 aaKnown RBP18■□□□□ 0.47
VCPKMT-203ENST00000484763 SIAEQ9HAT2 523 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 SHANK1Q9Y566 2161 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 B4GALT1P15291 398 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 DOC2BQ14184 412 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 NRN1LQ496H8 165 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 VWA1Q6PCB0 445 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 DCXRQ7Z4W1 244 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 ZNF416Q9BWM5 594 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 LHFPL6Q9Y693 200 aa18■□□□□ 0.47
VCPKMT-203ENST00000484763 J3QLW9 94 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 TNFSF13O75888 250 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 GLI4P10075 376 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 ZNF19P17023 458 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 CEACAM8P31997 349 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 OR12D2P58182 307 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 MLLT11Q13015 90 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 TP53I3Q53FA7 332 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 ARMCX4Q5H9R4 360 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 FAM27BQ5VT28 67 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 KCTD18Q6PI47 426 aaPredicted RBP17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 PLEKHG7Q6ZR37 379 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 ATCAYQ86WG3 371 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 OR2AJ1Q8NGZ0 328 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 OR52N5Q8NH56 324 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 AMELYQ99218 206 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 ABHD6Q9BV23 337 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 ASH2LQ9UBL3 628 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 GNG8Q9UK08 70 aa17.99■□□□□ 0.47
VCPKMT-203ENST00000484763 RP1L1Q8IWN7 2480 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 PRR32B1ATL7 298 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 CNOT4O95628 575 aaKnown RBP17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 KRT8P05787 483 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 ACSM1Q08AH1 577 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 ZNF684Q5T5D7 378 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 CORO6Q6QEF8 472 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 FAM220AQ7Z4H9 259 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 EGFL6Q8IUX8 553 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 NAXEQ8NCW5 288 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 ST7LQ8TDW4 575 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 OPALINQ96PE5 141 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 C1orf198Q9H425 327 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 ISYNA1Q9NPH2 558 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 TRIM36Q9NQ86 728 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 GDF2Q9UK05 429 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 IKZF2Q9UKS7 526 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 MAGEB4O15481 346 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 SULT1C4O75897 302 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 MPGP29372 298 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 SH3BGRP55822 239 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 BDH1Q02338 343 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 AQP6Q13520 282 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 ENDOGQ14249 297 aaKnown RBP17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 ZNF813Q6ZN06 617 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 VASH1Q7L8A9 365 aaPredicted RBP17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 ZNF627Q7L945 461 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 KCTD20Q7Z5Y7 419 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 KLBQ86Z14 1044 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 LRRC18Q8N456 261 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 SLC22A24Q8N4F4 322 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 OR8B4Q96RC9 309 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 PLSCR4Q9NRQ2 329 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 BABAM2Q9NXR7 383 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 SH3BGRL2Q9UJC5 107 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 PROCRQ9UNN8 238 aa17.98■□□□□ 0.47
VCPKMT-203ENST00000484763 INTS1Q8N201 2190 aaKnown RBP17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 METTL15A6NJ78 407 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 PSMD9O00233 223 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 FARS2O95363 451 aaKnown RBP17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 CST2P09228 141 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 OR8G3PP0DMU2 310 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 CASP6P55212 293 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 ARF1P84077 181 aaKnown RBP17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 ROM1Q03395 351 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 C9orf135Q5VTT2 229 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 BTLAQ7Z6A9 289 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 STARD4Q96DR4 205 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 SFXN3Q9BWM7 321 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 MROQ9BYG7 248 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 ACOXLQ9NUZ1 547 aa17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 MRM2Q9UI43 246 aaKnown RBP17.97■□□□□ 0.47
VCPKMT-203ENST00000484763 SMIM31A0A1B0GVY4 71 aa17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 A6NHS1 94 aa17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 LALBAP00709 142 aa17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 TACSTD2P09758 323 aa17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 LIPAP38571 399 aa17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 FOXG1P55316 489 aaPredicted RBP17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 TSTQ16762 297 aaKnown RBP17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 KLHL24Q6TFL4 600 aa17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 Q6ZT83 130 aa17.96■□□□□ 0.47
VCPKMT-203ENST00000484763 KRT77Q7Z794 578 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms