RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 PCSK6P29122 969 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 GRK5P34947 590 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 SLC25A1P53007 311 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 PSG4Q00888 419 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 HSF2Q03933 536 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 GLO1Q04760 184 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 ADIPOQQ15848 244 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 PABPC1L2AQ5JQF8 200 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 ZFP1Q6P2D0 407 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 CPEB3Q8NE35 698 aaKnown RBP13.73□□□□□ -0.21
UPF3A-208ENST00000484246 SLC26A10Q8NG04 563 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 OR1J2Q8NGS2 313 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 RBM4Q9BWF3 364 aaKnown RBP13.73□□□□□ -0.21
UPF3A-208ENST00000484246 NMNAT2Q9BZQ4 307 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 WNT5BQ9H1J7 359 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 RNF121Q9H920 327 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 CMC2Q9NRP2 79 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 FBXO9Q9UK97 447 aaPredicted RBP13.73□□□□□ -0.21
UPF3A-208ENST00000484246 ITGB1BP2Q9UKP3 347 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 COA3Q9Y2R0 106 aaPredicted RBP13.73□□□□□ -0.21
UPF3A-208ENST00000484246 SPEF1Q9Y4P9 236 aa13.73□□□□□ -0.21
UPF3A-208ENST00000484246 H7C417 338 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 IFNGP01579 166 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 GLRXP35754 106 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 RPS23P62266 143 aaKnown RBP13.72□□□□□ -0.21
UPF3A-208ENST00000484246 SNTB2Q13425 540 aaKnown RBP13.72□□□□□ -0.21
UPF3A-208ENST00000484246 DAG1Q14118 895 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 KPNB1Q14974 876 aaKnown RBP13.72□□□□□ -0.21
UPF3A-208ENST00000484246 SWI5Q1ZZU3 235 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 TBC1D28Q2M2D7 210 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 MST1LQ2TV78 715 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 SLC35F1Q5T1Q4 408 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 SLC27A4Q6P1M0 643 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 UGT2A3Q6UWM9 527 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 C10orf67Q8IYJ2 551 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 SVOPLQ8N434 492 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 ATG16L2Q8NAA4 619 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 SLC37A3Q8NCC5 494 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 OR2T4Q8NH00 348 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 C11orf40Q8WZ69 217 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 CENPNQ96H22 339 aaPredicted RBP13.72□□□□□ -0.21
UPF3A-208ENST00000484246 POM121L2Q96KW2 1035 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 TSSK2Q96PF2 358 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 RAB3IPQ96QF0 476 aaPredicted RBP13.72□□□□□ -0.21
UPF3A-208ENST00000484246 SLC25A19Q9HC21 320 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 EMC7Q9NPA0 242 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 RPRD1BQ9NQG5 326 aaKnown RBP13.72□□□□□ -0.21
UPF3A-208ENST00000484246 KCNG2Q9UJ96 466 aa13.72□□□□□ -0.21
UPF3A-208ENST00000484246 B9A039 149 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 H3BN98 237 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 OR4A8P0C604 315 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 BMP4P12644 408 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 ZNF3P17036 446 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 PRKACGP22612 351 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 STOMP27105 288 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 APLNRP35414 380 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 THBS4P35443 961 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 SERPINF1P36955 418 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 EVX1P49640 407 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 HIST1H3AP68431 136 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 CRMP1Q14194 572 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 HIST2H3PS2Q5TEC6 136 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 HIST2H3AQ71DI3 136 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 ZDHHC13Q8IUH4 622 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 ALDH16A1Q8IZ83 802 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 PAQR4Q8N4S7 273 aaPredicted RBP13.71□□□□□ -0.21
UPF3A-208ENST00000484246 LRTOMTQ8WZ04 291 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 OSBPL10Q9BXB5 764 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 PLK3Q9H4B4 646 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 CDH20Q9HBT6 801 aa13.71□□□□□ -0.21
UPF3A-208ENST00000484246 PAPOLBQ9NRJ5 636 aaKnown RBP13.71□□□□□ -0.21
UPF3A-208ENST00000484246 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
UPF3A-208ENST00000484246 RIIAD1A6NNX1 92 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 VSTM5A8MXK1 200 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 G3V2T6 193 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 H3BNX3 289 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 APEX1P27695 318 aaKnown RBP13.7□□□□□ -0.22
UPF3A-208ENST00000484246 DAPP51397 102 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 ADAM8P78325 824 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 CDK5Q00535 292 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 GALK2Q01415 458 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 DMRTA1Q5VZB9 504 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 KRT80Q6KB66 452 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 C1orf174Q8IYL3 243 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 CYB561A3Q8NBI2 242 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 AKR7LQ8NHP1 331 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 MRPL24Q96A35 216 aaKnown RBP13.7□□□□□ -0.22
UPF3A-208ENST00000484246 TRMT61AQ96FX7 289 aaKnown RBP13.7□□□□□ -0.22
UPF3A-208ENST00000484246 CACNG6Q9BXT2 260 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 BCL2L14Q9BZR8 327 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 BARX1Q9HBU1 254 aaPredicted RBP13.7□□□□□ -0.22
UPF3A-208ENST00000484246 KIF17Q9P2E2 1029 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 ASH2LQ9UBL3 628 aa13.7□□□□□ -0.22
UPF3A-208ENST00000484246 PRRC2AP48634 2157 aaKnown RBP13.7□□□□□ -0.22
UPF3A-208ENST00000484246 LOC100509620A0A075B734 347 aa13.69□□□□□ -0.22
UPF3A-208ENST00000484246 OR6C6A6NF89 314 aa13.69□□□□□ -0.22
UPF3A-208ENST00000484246 H3BSA7 217 aa13.69□□□□□ -0.22
UPF3A-208ENST00000484246 SGCEO43556 437 aa13.69□□□□□ -0.22
UPF3A-208ENST00000484246 SYNGR3O43761 229 aa13.69□□□□□ -0.22
UPF3A-208ENST00000484246 GPRIN2O60269 458 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms