RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 FAM53AQ6NSI3 398 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 PWWP2BQ6NUJ5 590 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 COX15Q7KZN9 410 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF571Q7Z3V5 609 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 MTERF4Q7Z6M4 381 aaKnown RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 FUNDC1Q8IVP5 155 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 APLFQ8IW19 511 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 MREGQ8N565 214 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 RFLNBQ8N5W9 214 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 OR2A12Q8NGT7 310 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 SSC4DQ8WTU2 575 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 DNASE2BQ8WZ79 361 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 RORBQ92753 470 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 CPNE4Q96A23 557 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 PPP1R14BQ96C90 147 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF75AQ96N20 296 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 MCCC1Q96RQ3 725 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 TSNAXQ99598 290 aaKnown RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 KLHDC3Q9BQ90 382 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 AGMATQ9BSE5 352 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 PLEKHA1Q9HB21 404 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 TMBIM4Q9HC24 238 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 RHBDL2Q9NX52 303 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 OR1A1Q9P1Q5 309 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 MUTYHQ9UIF7 546 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 ASF1AQ9Y294 204 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 V9GY05 133 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 TRIP12Q14669 1992 aaPredicted RBP3.56□□□□□ -1.84
PTCD3-214ENST00000483925 KIAA1210Q9ULL0 1709 aa3.56□□□□□ -1.84
PTCD3-214ENST00000483925 MROH7Q68CQ1 1323 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 TRAV8-7A0A075B6U6 113 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF816-ZNF321PA0A0X1KG74 233 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 MEIOCA2RUB1 952 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 TVP23AA6NH52 213 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 PMS2P5A8MQ11 134 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 H0YHG0 523 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA6L19H0YKK7 550 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 K7EN84 100 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 M0QXV9 152 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 SULT1C2O00338 296 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 HDAC3O15379 428 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 ERI3O43414 337 aaKnown RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 ICOSLGO75144 302 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 AQP8O94778 261 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 RCBTB2O95199 551 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 GP1BAP07359 652 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 OCM2P0CE71 109 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 CSNK2A2P19784 350 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 RAB4AP20338 218 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 RAB5AP20339 215 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 AK4P27144 223 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 MAS1LP35410 378 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 GPR6P46095 362 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 GSK3BP49841 420 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 SUB1P53999 127 aaKnown RBP eCLIP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 RPL31P62899 125 aaKnown RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 SLC25A11Q02978 314 aaKnown RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF92Q03936 586 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 ST3GAL4Q11206 333 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 STX5Q13190 355 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 FLOT2Q14254 428 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 CLINT1Q14677 625 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 SLC10A1Q14973 349 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 SIX1Q15475 284 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 KYAT1Q16773 422 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 GOLGA7BQ2TAP0 167 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 RBM48Q5RL73 367 aaKnown RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 IDNKQ5T6J7 187 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 UBE2UQ5VVX9 321 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 KHDRBS2Q5VWX1 349 aaKnown RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 FRMPD2BQ6IN97 320 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 UFSP1Q6NVU6 142 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 WDR74Q6RFH5 385 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 AHSA2Q719I0 299 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 TMUB2Q71RG4 321 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 HORMAD1Q86X24 394 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 CCDC71LQ8N9Z2 235 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 WDR31Q8NA23 367 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 OR2A1Q8NGT9 310 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 OR51A7Q8NH64 312 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 C11orf45Q8TAV5 145 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 PIK3IP1Q96FE7 263 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 B3GALT6Q96L58 329 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 PSMB7Q99436 277 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 SYT15Q9BQS2 421 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 RSG1Q9BU20 258 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF426Q9BUY5 554 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 MMP28Q9H239 520 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 OR51J1Q9H342 316 aa3.55□□□□□ -1.84
PTCD3-214ENST00000483925 NXF3Q9H4D5 531 aaKnown RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 WDR55Q9H6Y2 383 aaPredicted RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 ISG20L2Q9H9L3 353 aaKnown RBP3.55□□□□□ -1.84
PTCD3-214ENST00000483925 MAP3K5Q99683 1374 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 IGLV4-3A0A075B6K6 122 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 IGKV1D-8A0A087WSZ0 117 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 A6NDN8 102 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 EFCAB7A8K855 629 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 ZNF487B1APH4 448 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 CENPBD1B2RD01 187 aa3.54□□□□□ -1.84
PTCD3-214ENST00000483925 DFFAO00273 331 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms