RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 HIPK4Q8NE63 616 aa10.78□□□□□ -0.68
UBR4-213ENST00000483922 ITLN1Q8WWA0 313 aa10.78□□□□□ -0.68
UBR4-213ENST00000483922 ZNF607Q96SK3 696 aa10.78□□□□□ -0.68
UBR4-213ENST00000483922 MRI1Q9BV20 369 aa10.78□□□□□ -0.68
UBR4-213ENST00000483922 OR2H1Q9GZK4 316 aa10.78□□□□□ -0.68
UBR4-213ENST00000483922 TNFRSF19Q9NS68 423 aa10.78□□□□□ -0.68
UBR4-213ENST00000483922 SLC7A7Q9UM01 511 aa10.78□□□□□ -0.68
UBR4-213ENST00000483922 PRORSD1PA6NEY8 169 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 TMEM178BH3BS89 294 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 ENTPD5O75356 428 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 ERLIN1O75477 346 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 KNG1P01042 644 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 FUT1P19526 365 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 CD247P20963 164 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 SLC6A2P23975 617 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 LAP3P28838 519 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 LIPAP38571 399 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 MRPL19P49406 292 aaKnown RBP10.77□□□□□ -0.69
UBR4-213ENST00000483922 GDI2P50395 445 aaKnown RBP10.77□□□□□ -0.69
UBR4-213ENST00000483922 MTX3Q5HYI7 312 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 EPGNQ6UW88 154 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 DLEU7Q6UYE1 221 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 SPICQ8N5J4 248 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 ANKRD42Q8N9B4 389 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 OR10S1Q8NGN2 331 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 PFN4Q8NHR9 129 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 C10orf82Q8WW14 230 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 NSMAFQ92636 917 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 C4orf45Q96LM5 186 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 RBM4BQ9BQ04 359 aaKnown RBP10.77□□□□□ -0.69
UBR4-213ENST00000483922 CHIAQ9BZP6 476 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 CYSLTR2Q9NS75 346 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 C20orf141Q9NUB4 165 aa10.77□□□□□ -0.69
UBR4-213ENST00000483922 EIF3KQ9UBQ5 218 aaKnown RBP10.77□□□□□ -0.69
UBR4-213ENST00000483922 TRAV40A0A0B4J280 105 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 CENPBD1B2RD01 187 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 SRRM5B3KS81 715 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 SELEP16581 610 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 FUT4P22083 530 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 MTNR1AP48039 350 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 RAG2P55895 527 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 SELPLGQ14242 412 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 ENDOGQ14249 297 aaKnown RBP10.76□□□□□ -0.69
UBR4-213ENST00000483922 OLFML2AQ68BL7 652 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 FIP1L1Q6UN15 594 aaKnown RBP10.76□□□□□ -0.69
UBR4-213ENST00000483922 Q6YL49 198 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 NKAIN4Q8IVV8 208 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 MREGQ8N565 214 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 OR2Z1Q8NG97 314 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 VANGL1Q8TAA9 524 aaPredicted RBP10.76□□□□□ -0.69
UBR4-213ENST00000483922 RAB40AQ8WXH6 277 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 CMBLQ96DG6 245 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 CCT8L2Q96SF2 557 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 CPPED1Q9BRF8 314 aaPredicted RBP10.76□□□□□ -0.69
UBR4-213ENST00000483922 PCDHAC1Q9H158 963 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 MMP27Q9H306 513 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 MARCH7Q9H992 704 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 BEX1Q9HBH7 125 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 GCM1Q9NP62 436 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 CCNB1IP1Q9NPC3 277 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 ZNF281Q9Y2X9 895 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 STARD10Q9Y365 291 aa10.76□□□□□ -0.69
UBR4-213ENST00000483922 IGHV2-70DA0A0C4DH43 119 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 KIR2DS1A0A191URI9 304 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 CLPSL1A2RUU4 121 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 TRAPPC13A5PLN9 417 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 SERPINB7O75635 380 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 HIST1H2ABP04908 130 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 UMPSP11172 480 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 KITLGP21583 273 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 PMELP40967 661 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 ESCO2Q56NI9 601 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 RUNDC3AQ59EK9 446 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 FAM201AQ5SY85 155 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 RUSC1-AS1Q66K80 236 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 LYPD2Q6UXB3 125 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 FOXL2NBQ6ZUU3 175 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 HIST3H2AQ7L7L0 130 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 NANOGNBQ7Z5D8 188 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 KLBQ86Z14 1044 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 ZNF420Q8TAQ5 688 aaPredicted RBP10.75□□□□□ -0.69
UBR4-213ENST00000483922 HIST1H2ACQ93077 130 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 SPDL1Q96EA4 605 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 CDADC1Q9BWV3 514 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 SSBP3Q9BWW4 388 aaPredicted RBP10.75□□□□□ -0.69
UBR4-213ENST00000483922 SLC19A3Q9BZV2 496 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 INIPQ9NRY2 104 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 CCDC167Q9P0B6 97 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 CGGBP1Q9UFW8 167 aaPredicted RBP10.75□□□□□ -0.69
UBR4-213ENST00000483922 IL19Q9UHD0 177 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 PPP1R3CQ9UQK1 317 aa10.75□□□□□ -0.69
UBR4-213ENST00000483922 A0A1W2PRG6 482 aa10.74□□□□□ -0.69
UBR4-213ENST00000483922 H0YL77 283 aa10.74□□□□□ -0.69
UBR4-213ENST00000483922 H3BSA7 217 aa10.74□□□□□ -0.69
UBR4-213ENST00000483922 TIMM8AO60220 97 aaPredicted RBP10.74□□□□□ -0.69
UBR4-213ENST00000483922 OR7A10O76100 309 aa10.74□□□□□ -0.69
UBR4-213ENST00000483922 NDUFA7O95182 113 aa10.74□□□□□ -0.69
UBR4-213ENST00000483922 TSPAN15O95858 294 aa10.74□□□□□ -0.69
UBR4-213ENST00000483922 CYB5R3P00387 301 aaPredicted RBP10.74□□□□□ -0.69
UBR4-213ENST00000483922 CST2P09228 141 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms