RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 DNM1P34Q6PK57 102 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 UGT2A3Q6UWM9 527 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 ASRGL1Q7L266 308 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 TMEM179BQ7Z7N9 219 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 LNX2Q8N448 690 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 NPEPL1Q8NDH3 523 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 OR4K13Q8NH42 304 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 C18orf12Q96KH6 178 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 COX4I2Q96KJ9 171 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 POM121L2Q96KW2 1035 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 DDOQ99489 341 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 BDH2Q9BUT1 245 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 CDH20Q9HBT6 801 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 EMC7Q9NPA0 242 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 DNAJB9Q9UBS3 223 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 BAIAP2Q9UQB8 552 aa15.51■□□□□ 0.07
HDAC6-225ENST00000483506 COA3Q9Y2R0 106 aaPredicted RBP15.51■□□□□ 0.07
HDAC6-225ENST00000483506 ZANQ9Y493 2812 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 RENP00797 406 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 COX5BP10606 129 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 STOMP27105 288 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 NOS3P29474 1203 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 APLNRP35414 380 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 SCRN3Q0VDG4 424 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 RAB35Q15286 201 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 CLEC12BQ2HXU8 276 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 ZNF362Q5T0B9 420 aaPredicted RBP15.5■□□□□ 0.07
HDAC6-225ENST00000483506 ALDH16A1Q8IZ83 802 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 OR6V1Q8N148 313 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 AKR7LQ8NHP1 331 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 DUS3LQ96G46 650 aaKnown RBP15.5■□□□□ 0.07
HDAC6-225ENST00000483506 TSSK2Q96PF2 358 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 FEVQ99581 238 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 NIPSNAP1Q9BPW8 284 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 B9D1Q9UPM9 204 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 FKBP7Q9Y680 259 aa15.5■□□□□ 0.07
HDAC6-225ENST00000483506 LOC100509620A0A075B734 347 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 OR6C68A6NDL8 312 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 TRIM64A6NGJ6 449 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 TRIM64BA6NI03 449 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 GNGT2O14610 69 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 CCL2P13500 99 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 EFNA4P52798 201 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.49■□□□□ 0.07
HDAC6-225ENST00000483506 AQP6Q13520 282 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 SVOPLQ8N434 492 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 SDR9C7Q8NEX9 313 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 C11orf40Q8WZ69 217 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 UTP4Q969X6 686 aaKnown RBP15.49■□□□□ 0.07
HDAC6-225ENST00000483506 MRPL37Q9BZE1 423 aaKnown RBP15.49■□□□□ 0.07
HDAC6-225ENST00000483506 BCL2L14Q9BZR8 327 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 NTN4Q9HB63 628 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 TBC1D23Q9NUY8 699 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 REV1Q9UBZ9 1251 aa15.49■□□□□ 0.07
HDAC6-225ENST00000483506 MPZL1O95297 269 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 F12P00748 615 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-225ENST00000483506 IGFBP1P08833 259 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-225ENST00000483506 RAD52P43351 418 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 NUDT6P53370 316 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 UCP2P55851 309 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 GLO1Q04760 184 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 ZNF774Q6NX45 483 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 C1orf174Q8IYL3 243 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 SLC26A10Q8NG04 563 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 OR2T33Q8NG76 320 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 OR52E2Q8NGJ4 325 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 OR4Q3Q8NH05 313 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 NRBF2Q96F24 287 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 FOXN4Q96NZ1 517 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 SORCS2Q96PQ0 1159 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 TSSK6Q9BXA6 273 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 RPRD1BQ9NQG5 326 aaKnown RBP15.48■□□□□ 0.07
HDAC6-225ENST00000483506 ARMC1Q9NVT9 282 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 PDP1Q9P0J1 537 aaPredicted RBP15.48■□□□□ 0.07
HDAC6-225ENST00000483506 ATPIF1Q9UII2 106 aa15.48■□□□□ 0.07
HDAC6-225ENST00000483506 NDRG4Q9ULP0 352 aaKnown RBP15.48■□□□□ 0.07
HDAC6-225ENST00000483506 IGLV3-9A0A075B6K5 115 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 H7C1Q1 480 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 SSX4O60224 188 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 DEAF1O75398 565 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-225ENST00000483506 E2F6O75461 281 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 SOX14O95416 240 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 INHBBP09529 407 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 FAM157BP0CG42 384 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 ZNF250P15622 560 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 WNT5AP41221 380 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 GDI2P50395 445 aaKnown RBP15.47■□□□□ 0.07
HDAC6-225ENST00000483506 ERFP50548 548 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 DSCR9P59020 149 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 HIST1H3AP68431 136 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 TNK1Q13470 666 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 SLC35F1Q5T1Q4 408 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 HIST2H3PS2Q5TEC6 136 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 C1orf146Q5VVC0 180 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 RGS7BPQ6MZT1 257 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-225ENST00000483506 SHQ1Q6PI26 577 aaKnown RBP15.47■□□□□ 0.07
HDAC6-225ENST00000483506 HIST2H3AQ71DI3 136 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 VASH1Q7L8A9 365 aaPredicted RBP15.47■□□□□ 0.07
HDAC6-225ENST00000483506 BIVMQ86UB2 503 aa15.47■□□□□ 0.07
HDAC6-225ENST00000483506 CIARTQ8N365 385 aaPredicted RBP15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms