RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ITGA2P17301 1181 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 MSR1P21757 451 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 RPL4P36578 427 aaKnown RBP15.78■□□□□ 0.12
CLK1-211ENST00000481641 RBMXP38159 391 aaKnown RBP15.78■□□□□ 0.12
CLK1-211ENST00000481641 MDH1P40925 334 aaKnown RBP15.78■□□□□ 0.12
CLK1-211ENST00000481641 SLC9A3P48764 834 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 NUDT2P50583 147 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 MMP15P51511 669 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 RAP1BP61224 184 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 PPP1CBP62140 327 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 RAP1AP62834 184 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 MOGQ16653 247 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 SPRNQ5BIV9 151 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 LIPNQ5VXI9 398 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 FAM205BPQ63HN1 556 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 THSD4Q6ZMP0 1018 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 ZNF771Q7L3S4 317 aaPredicted RBP15.78■□□□□ 0.12
CLK1-211ENST00000481641 RNF113BQ8IZP6 322 aaKnown RBP15.78■□□□□ 0.12
CLK1-211ENST00000481641 RFLNBQ8N5W9 214 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 FAM162AQ96A26 154 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 Q96M85 177 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 HOPXQ9BPY8 73 aaPredicted RBP15.78■□□□□ 0.12
CLK1-211ENST00000481641 METTL17Q9H7H0 456 aaPredicted RBP15.78■□□□□ 0.12
CLK1-211ENST00000481641 ZNF665Q9H7R5 613 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 EFCAB1Q9HAE3 211 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 SAP30LQ9HAJ7 183 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 POLE4Q9NR33 117 aa15.78■□□□□ 0.12
CLK1-211ENST00000481641 IMPA2O14732 288 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 CCDC22O60826 627 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 MT-ND5P03915 603 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 PCMT1P22061 227 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 GUCA1AP43080 201 aaPredicted RBP15.77■□□□□ 0.12
CLK1-211ENST00000481641 ZBED5Q49AG3 693 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 MESTQ5EB52 335 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 MBNL2Q5VZF2 373 aaKnown RBP15.77■□□□□ 0.12
CLK1-211ENST00000481641 ALDH16A1Q8IZ83 802 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 OR51F2Q8NH61 342 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 FNDC8Q8TC99 324 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 FAM46AQ96IP4 442 aaKnown RBP15.77■□□□□ 0.12
CLK1-211ENST00000481641 KCTD14Q9BQ13 255 aaPredicted RBP15.77■□□□□ 0.12
CLK1-211ENST00000481641 POFUT1Q9H488 388 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 OCEL1Q9H607 264 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 NMNAT1Q9HAN9 279 aaPredicted RBP15.77■□□□□ 0.12
CLK1-211ENST00000481641 GRHPRQ9UBQ7 328 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 METRNQ9UJH8 293 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 WIPI2Q9Y4P8 454 aa15.77■□□□□ 0.12
CLK1-211ENST00000481641 ANK2Q01484 3957 aa15.77■□□□□ 0.11
CLK1-211ENST00000481641 ARHGAP32A7KAX9 2087 aa15.77■□□□□ 0.11
CLK1-211ENST00000481641 CD14P08571 375 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 PCBD1P61457 104 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 TEKQ02763 1124 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 ANKDD1AQ495B1 522 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 HSP90B2PQ58FF3 399 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 FAHD2BQ6P2I3 314 aaPredicted RBP15.76■□□□□ 0.11
CLK1-211ENST00000481641 TMPRSS11FQ6ZWK6 438 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 RRM2BQ7LG56 351 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 SLC7A13Q8TCU3 470 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 CCL17Q92583 94 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 RASD2Q96D21 266 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 FAHD2AQ96GK7 314 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 C4orf45Q96LM5 186 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 MSL2Q9HCI7 577 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 EGFL7Q9UHF1 273 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 IL20RAQ9UHF4 553 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 GRIP1Q9Y3R0 1128 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 ENPP4Q9Y6X5 453 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 WNK2Q9Y3S1 2297 aa15.76■□□□□ 0.11
CLK1-211ENST00000481641 PLSCR5A0PG75 271 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 C12orf71A8MTZ7 269 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 CLDN25C9JDP6 229 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 PLPP2O43688 288 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 DEAF1O75398 565 aaPredicted RBP15.75■□□□□ 0.11
CLK1-211ENST00000481641 RGS9O75916 674 aaPredicted RBP15.75■□□□□ 0.11
CLK1-211ENST00000481641 DIRAS1O95057 198 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 AVPP01185 164 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 CTLA4P16410 223 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 PSME3P61289 254 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 HFEQ30201 348 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 ACSM5Q6NUN0 579 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 HACD2Q6Y1H2 254 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 C1orf229Q6ZS94 237 aaPredicted RBP15.75■□□□□ 0.11
CLK1-211ENST00000481641 FAM122BQ7Z309 247 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 CYP4Z1Q86W10 505 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 ELMOD3Q96FG2 381 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 ZNF570Q96NI8 536 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 RERGLQ9H628 205 aa15.75■□□□□ 0.11
CLK1-211ENST00000481641 TEX13CA0A0J9YWL9 993 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 PRSS37A4D1T9 235 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 XKRYO14609 159 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 PTP4A3O75365 173 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 VENTXO95231 258 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 MPZL1O95297 269 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 PSG7Q13046 419 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 FGD3Q5JSP0 725 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 FAM209AQ5JX71 171 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 UNQ6126/PRO20091Q6UXV3 157 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 FAM86B1Q8N7N1 296 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 FAM156AQ8NDB6 213 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 SLC7A6Q92536 515 aa15.74■□□□□ 0.11
CLK1-211ENST00000481641 ELAC2Q9BQ52 826 aaKnown RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms