RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 SNX18Q96RF0 628 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 DCLRE1CQ96SD1 692 aaKnown RBP9.81□□□□□ -0.84
CCM2-213ENST00000480658 ELAC2Q9BQ52 826 aaKnown RBP9.81□□□□□ -0.84
CCM2-213ENST00000480658 OR2H1Q9GZK4 316 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 UGT2A1Q9Y4X1 527 aa9.81□□□□□ -0.84
CCM2-213ENST00000480658 TRAV20A0A0B4J274 112 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 IGHV1-69-2A0A0G2JMI3 117 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 RNF212BA8MTL3 300 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 FFAR1O14842 300 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 SURF4O15260 269 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 PIP5K1CO60331 668 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 LILRA1O75019 489 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 ADH4P08319 380 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 NAT2P11245 290 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 LAP3P28838 519 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 CRYBB2P43320 205 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 GPR4P46093 362 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 YAP1P46937 504 aaKnown RBP9.8□□□□□ -0.84
CCM2-213ENST00000480658 ERVK-25P63136 954 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 PSG4Q00888 419 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 FMODQ06828 376 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 KRR1Q13601 381 aaKnown RBP9.8□□□□□ -0.84
CCM2-213ENST00000480658 MTX3Q5HYI7 312 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 ELFN2Q5R3F8 820 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 LSRQ86X29 649 aaPredicted RBP9.8□□□□□ -0.84
CCM2-213ENST00000480658 GLB1L2Q8IW92 636 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 RFLNBQ8N5W9 214 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 LRRC75AQ8NAA5 344 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 OR5L1Q8NGL2 311 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 OR13C2Q8NGS9 318 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 ABHD4Q8TB40 342 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 RAB1CQ92928 201 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 C4orf45Q96LM5 186 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 MUC13Q9H3R2 512 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 NRIP3Q9NQ35 241 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 POLE4Q9NR33 117 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 TBCCD1Q9NVR7 557 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 NDUFAF4Q9P032 175 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 RHCGQ9UBD6 479 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 TMEFF2Q9UIK5 374 aaPredicted RBP9.8□□□□□ -0.84
CCM2-213ENST00000480658 ARL2BPQ9Y2Y0 163 aa9.8□□□□□ -0.84
CCM2-213ENST00000480658 CSPG4Q6UVK1 2322 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 A0A0A6YYJ9 748 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 J3KTA2 159 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 IFNL4K9M1U5 179 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 IMPA2O14732 288 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 PPIHO43447 177 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 DOK2O60496 412 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 KHDRBS3O75525 346 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 KRT36O76013 467 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 ABHD16AO95870 558 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 HPXP02790 462 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 MSMBP08118 114 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 CCL2P13500 99 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 HOXB6P17509 224 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 TNFRSF1AP19438 455 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 GATA3P23771 443 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 CPT2P23786 658 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 SLC6A6P31641 620 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 CDAP32320 146 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 SRP14P37108 136 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 PPP1CBP62140 327 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 GLO1Q04760 184 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 MAD2L1BPQ15013 274 aaPredicted RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 CR1LQ2VPA4 569 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 SHQ1Q6PI26 577 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 SMARCD3Q6STE5 483 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 FAM122BQ7Z309 247 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 TREML1Q86YW5 311 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 ZCCHC24Q8N2G6 241 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 FGFBP3Q8TAT2 258 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 FANK1Q8TC84 345 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 KLF14Q8TD94 323 aaPredicted RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 PYURFQ96I23 114 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 FAM46AQ96IP4 442 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 RSRC1Q96IZ7 334 aaKnown RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 DHRS1Q96LJ7 313 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 NSMCE2Q96MF7 247 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 FAM107BQ9H098 131 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 ZNF275Q9NSD4 429 aaPredicted RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 VSX1Q9NZR4 365 aaPredicted RBP9.79□□□□□ -0.84
CCM2-213ENST00000480658 TAGLN3Q9UI15 199 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 TMCC3Q9ULS5 477 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 FZR1Q9UM11 496 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 SIGLEC7Q9Y286 467 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 SNX13Q9Y5W8 968 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 ARFGEF3Q5TH69 2177 aa9.79□□□□□ -0.84
CCM2-213ENST00000480658 LRP5LA4QPB2 252 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 OR6C6A6NF89 314 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 CDC42EP2O14613 210 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 PHF1O43189 567 aaPredicted RBP9.78□□□□□ -0.84
CCM2-213ENST00000480658 SGCEO43556 437 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 IDH3BO43837 385 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 GADD45GO95257 159 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 TXNDC12O95881 172 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 FABP3P05413 133 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 IGFBP1P08833 259 aaPredicted RBP9.78□□□□□ -0.84
CCM2-213ENST00000480658 FPR3P25089 353 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 NOS3P29474 1203 aa9.78□□□□□ -0.84
CCM2-213ENST00000480658 OMPP47874 163 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms