RNA–Protein interactions for RNA: ENST00000479894.1

HDLBP-238, Transcript of high density lipoprotein binding protein, human

TSL 5

Gene HDLBP, Length 840 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-238	ENST00000479894	ZBTB49	Q6ZSB9	765 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	ADCK1	Q86TW2	530 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	UBE2J2	Q8N2K1	259 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	KDM8	Q8N371	416 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	GPR137C	Q8N3F9	429 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZIC4	Q8N9L1	334 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	OR2T33	Q8NG76	320 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	NEU4	Q8WWR8	484 aa	Predicted RBP	13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF566	Q969W8	418 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	MRPL24	Q96A35	216 aa	Known RBP	13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	RBP7	Q96R05	134 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	SNX18	Q96RF0	628 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	ALG12	Q9BV10	488 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	IFT27	Q9BW83	186 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	LINC00470	Q9BZP3	86 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	VCX3B	Q9H321	246 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	OR52D1	Q9H346	318 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	NRIP3	Q9NQ35	241 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	TBC1D23	Q9NUY8	699 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	ASB6	Q9NWX5	421 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	MALT1	Q9UDY8	824 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	AMDHD2	Q9Y303	409 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894	GRIP1	Q9Y3R0	1128 aa		13.44	□□□□□ -0.26
HDLBP-238	ENST00000479894		M0R3G1	203 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	MGRN1	O60291	552 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	SERPINI2	O75830	405 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	IFNG	P01579	166 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	HMGN1	P05114	100 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	F13B	P05160	661 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	DAO	P14920	347 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	PRKACG	P22612	351 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	PAX7	P23759	505 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	SDHA	P31040	664 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	SERPINF1	P36955	418 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	IDH3G	P51553	393 aa	Predicted RBP	13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	SH3BGR	P55822	239 aa	Predicted RBP	13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	BID	P55957	195 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	EFNB3	Q15768	340 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	OCLN	Q16625	522 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	TMEM179B	Q7Z7N9	219 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF786	Q8N393	782 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	PACRGL	Q8N7B6	248 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	WDR31	Q8NA23	367 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	C1orf162	Q8NEQ5	155 aa	Predicted RBP	13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	OR6N1	Q8NGY5	312 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	MOSPD2	Q8NHP6	518 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	KATNB1	Q9BVA0	655 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	C1QTNF6	Q9BXI9	259 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	PLK3	Q9H4B4	646 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	USE1	Q9NZ43	259 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	SEC14L4	Q9UDX3	406 aa		13.43	□□□□□ -0.26
HDLBP-238	ENST00000479894	SAC3D1	A6NKF1	404 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF587B	E7ETH6	402 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF432	O94892	652 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	TXNDC12	O95881	172 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ERCC1	P07992	297 aa	Predicted RBP	13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ACADS	P16219	412 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	GUCA1A	P43080	201 aa	Predicted RBP	13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	CSNK1A1	P48729	337 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ALDH3A2	P51648	485 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	CLRN1	P58418	232 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	SLC34A1	Q06495	639 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	RIN1	Q13671	783 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	DAG1	Q14118	895 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	TRIP10	Q15642	601 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	KDM4D	Q6B0I6	523 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	SLC27A4	Q6P1M0	643 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	LRRC75A	Q8NAA5	344 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	TMEM186	Q96B77	213 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF775	Q96BV0	537 aa	Predicted RBP	13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF570	Q96NI8	536 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	RDH12	Q96NR8	316 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	ZNF385A	Q96PM9	386 aa	Known RBP	13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	OR2M2	Q96R28	347 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	GPA33	Q99795	319 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	CIB1	Q99828	191 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	NIPSNAP1	Q9BPW8	284 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	TSSK6	Q9BXA6	273 aa		13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	RRP15	Q9Y3B9	282 aa	Known RBP	13.42	□□□□□ -0.26
HDLBP-238	ENST00000479894	RGS9	O75916	674 aa	Predicted RBP	13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	EPHA1	P21709	976 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	ERVK-25	P63136	954 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	FHL1	Q13642	323 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	THEM4	Q5T1C6	240 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	ARMC4	Q5T2S8	1044 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	DNM1P34	Q6PK57	102 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	NHLRC1	Q6VVB1	395 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	JAZF1	Q86VZ6	243 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	C20orf196	Q8IYI0	205 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	LNX2	Q8N448	690 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	CBR4	Q8N4T8	237 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	ASB10	Q8WXI3	467 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	SAMD8	Q96LT4	415 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	ERMAP	Q96PL5	475 aa	Predicted RBP	13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	SLC38A2	Q96QD8	506 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	SUCNR1	Q9BXA5	334 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	SMURF2	Q9HAU4	748 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	RNPEPL1	Q9HAU8	725 aa		13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	MOV10	Q9HCE1	1003 aa	Known RBP	13.41	□□□□□ -0.26
HDLBP-238	ENST00000479894	SLC17A5	Q9NRA2	495 aa		13.41	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms