RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 SLC25A1P53007 311 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 FAM78AQ5JUQ0 283 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 SPRED2Q7Z698 418 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 FLVCR1-AS1Q8TAF5 88 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 SLC41A2Q96JW4 573 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 CNTNAP3BQ96NU0 1288 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 TSPAN32Q96QS1 320 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 KLHDC3Q9BQ90 382 aa18.69■□□□□ 0.58
COL13A1-208ENST00000479733 TBC1D3DA0A087WVF3 549 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 PRSS38A1L453 326 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 TBC1D3LB9A6J9 549 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 EIF3GO75821 320 aaKnown RBP eCLIP18.68■□□□□ 0.58
COL13A1-208ENST00000479733 TBC1D3HP0C7X1 549 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 LSSP48449 732 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 SCAND1P57086 179 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 PMPCAQ10713 525 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 IGSF11Q5DX21 431 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 TBC1D3CQ6IPX1 549 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 CBLN3Q6UW01 205 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 TMPPEQ6ZT21 453 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 SLC16A13Q7RTY0 426 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 ZNF584Q8IVC4 421 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 TBC1D3Q8IZP1 549 aaPredicted RBP18.68■□□□□ 0.58
COL13A1-208ENST00000479733 ELP5Q8TE02 316 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 SLC22A18Q96BI1 424 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 KTI12Q96EK9 354 aaPredicted RBP18.68■□□□□ 0.58
COL13A1-208ENST00000479733 HRH4Q9H3N8 390 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 DHDHQ9UQ10 334 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 CSAG2Q9Y5P2 127 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 PRR19A6NJB7 356 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 S1PR1P21453 382 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 AIMP2Q13155 320 aaKnown RBP18.68■□□□□ 0.58
COL13A1-208ENST00000479733 RBM39Q14498 530 aaKnown RBP18.68■□□□□ 0.58
COL13A1-208ENST00000479733 PDGFRLQ15198 375 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 ELOCQ15369 112 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 NKAPLQ5M9Q1 402 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 TMEM225Q6GV28 225 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 PAPD4Q6PIY7 484 aaKnown RBP18.68■□□□□ 0.58
COL13A1-208ENST00000479733 ADAD2Q8NCV1 583 aaKnown RBP18.68■□□□□ 0.58
COL13A1-208ENST00000479733 FAM174AQ8TBP5 190 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 PATE1Q8WXA2 126 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 PMM1Q92871 262 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 OR2M4Q96R27 311 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 EPHA6Q9UF33 1036 aa18.68■□□□□ 0.58
COL13A1-208ENST00000479733 A0A1W2PPC1 479 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 LINC00587B1AMM8 73 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 SPARCP09486 303 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 AVPI1Q5T686 147 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 DHRS7BQ6IAN0 325 aaPredicted RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 CHST4Q8NCG5 386 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 OR4A4PQ8NGN8 299 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 EDAQ92838 391 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 ARL11Q969Q4 196 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 ZNF524Q96C55 264 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 SEMA6CQ9H3T2 930 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 OR2S2Q9NQN1 319 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 THAP10Q9P2Z0 257 aaPredicted RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 ARPC4-TTLL3A0A0A6YYG9 625 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 APBB3O95704 486 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 LINC00271P0C7V0 271 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 SNRPEP62304 92 aaKnown RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 C2orf27AQ580R0 203 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 RNASE10Q5GAN6 216 aaKnown RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 LYG2Q86SG7 212 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 OR1E3Q8WZA6 343 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 FOXRED1Q96CU9 486 aaPredicted RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 ZFP57Q9NU63 452 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 B9D1Q9UPM9 204 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 HIF3AQ9Y2N7 669 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 GON4LQ3T8J9 2241 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 ARHGEF17Q96PE2 2063 aaPredicted RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 SPEGQ15772 3267 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 MEX3AA1L020 520 aaKnown RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 EFCAB7A8K855 629 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 ZBTB25P24278 435 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 CD96P40200 585 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 MFGE8Q08431 387 aaPredicted RBP18.67■□□□□ 0.58
COL13A1-208ENST00000479733 KLHL26Q53HC5 615 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 SFTPA2Q8IWL1 248 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 ROBO4Q8WZ75 1007 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 FAM46BQ96A09 425 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 PIK3IP1Q96FE7 263 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 Q9N2J8 555 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 MMP25Q9NPA2 562 aa18.67■□□□□ 0.58
COL13A1-208ENST00000479733 C9orf170A2RU37 121 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 SNAPINO95295 136 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 RENP00797 406 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 ERCC1P07992 297 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-208ENST00000479733 ZNF806P0C7X5 589 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 SEC13P55735 322 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 RPS21P63220 83 aaKnown RBP18.66■□□□□ 0.58
COL13A1-208ENST00000479733 ZNF141Q15928 474 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 ISXQ2M1V0 245 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 LPCAT3Q6P1A2 487 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 CSNK1A1LQ8N752 337 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 LRRC75AQ8NAA5 344 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 OR4K17Q8NGC6 315 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 PHOSPHO1Q8TCT1 267 aa18.66■□□□□ 0.58
COL13A1-208ENST00000479733 SLC25A44Q96H78 314 aaPredicted RBP18.66■□□□□ 0.58
COL13A1-208ENST00000479733 VSTM2LQ96N03 204 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms