RNA–Protein interactions for RNA: ENST00000479542.1

ABCF1-206, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 2

Gene ABCF1, Length 893 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-206ENST00000479542 KLF10Q13118 480 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 ANKDD1AQ495B1 522 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 C9orf139Q6ZV77 190 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 LRRC28Q86X40 367 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-206ENST00000479542 RBM45Q8IUH3 476 aaKnown RBP11.24□□□□□ -0.61
ABCF1-206ENST00000479542 SPICQ8N5J4 248 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 SLC25A40Q8TBP6 338 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 IPCEF1Q8WWN9 437 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-206ENST00000479542 TAMM41Q96BW9 452 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 TXNIPQ9H3M7 391 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 NANOGQ9H9S0 305 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 PATZ1Q9HBE1 687 aaKnown RBP11.24□□□□□ -0.61
ABCF1-206ENST00000479542 MRGBPQ9NV56 204 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 TBCCD1Q9NVR7 557 aa11.24□□□□□ -0.61
ABCF1-206ENST00000479542 PURGQ9UJV8 347 aaKnown RBP11.24□□□□□ -0.61
ABCF1-206ENST00000479542 TANC2Q9HCD6 1990 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 C5orf49A4QMS7 147 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 ZSCAN5BA6NJL1 495 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 KCNAB3O43448 404 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 SPRY3O43610 288 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 RGS9O75916 674 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-206ENST00000479542 OR5F1O95221 314 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 F13BP05160 661 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 RNASE1P07998 156 aaKnown RBP11.23□□□□□ -0.61
ABCF1-206ENST00000479542 TNFRSF1AP19438 455 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
ABCF1-206ENST00000479542 MPV17P39210 176 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 MDH1P40925 334 aaKnown RBP11.23□□□□□ -0.61
ABCF1-206ENST00000479542 GUCA1AP43080 201 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-206ENST00000479542 GZMMP51124 257 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 ARHGDIAP52565 204 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 PPP1CBP62140 327 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 IL13RA1P78552 427 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 ZNF154Q13106 437 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 MTX3Q5HYI7 312 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 TMEM255AQ5JRV8 349 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 FAM205BPQ63HN1 556 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 NANOGP8Q6NSW7 305 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 KLHL36Q8N4N3 616 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 OR10A6Q8NH74 314 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 SLC26A7Q8TE54 656 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 GTF3AQ92664 365 aaKnown RBP11.23□□□□□ -0.61
ABCF1-206ENST00000479542 SGTBQ96EQ0 304 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 C4orf45Q96LM5 186 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 COG8Q96MW5 612 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 RBP7Q96R05 134 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 OR2J1Q9GZK6 312 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 OR51B6Q9H340 312 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 MAN2C1Q9NTJ4 1040 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 TMEM106BQ9NUM4 274 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 IL20RAQ9UHF4 553 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 BAG5Q9UL15 447 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 HIF3AQ9Y2N7 669 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 PCDHGB1Q9Y5G3 927 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 INSIG2Q9Y5U4 225 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 AUP1Q9Y679 476 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 ARHGAP32A7KAX9 2087 aa11.23□□□□□ -0.61
ABCF1-206ENST00000479542 F5H0A9 414 aaPredicted RBP11.22□□□□□ -0.61
ABCF1-206ENST00000479542 J3QW42 95 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 FXYD1O00168 92 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 ATP8B1O43520 1251 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 AHCYL1O43865 530 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 OPN1SWP03999 348 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 KITLGP21583 273 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 CCNOP22674 350 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 AQP2P41181 271 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 CRYBA2P53672 197 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 LCN2P80188 198 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 PAX8Q06710 450 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 CYLC2Q14093 348 aaPredicted RBP11.22□□□□□ -0.61
ABCF1-206ENST00000479542 VMACQ2NL98 169 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 RABL3Q5HYI8 236 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 COQ5Q5HYK3 327 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 SIGLECL1Q8N7X8 197 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 FAM156AQ8NDB6 213 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 NPEPL1Q8NDH3 523 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 ICA1LQ8NDH6 482 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 C10orf82Q8WW14 230 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 TMEM239Q8WW34 195 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 HDAC2Q92769 488 aaKnown RBP11.22□□□□□ -0.61
ABCF1-206ENST00000479542 SH3GL1Q99961 368 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 OR2H1Q9GZK4 316 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 WNT5BQ9H1J7 359 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 IL19Q9UHD0 177 aa11.22□□□□□ -0.61
ABCF1-206ENST00000479542 NDRG4Q9ULP0 352 aaKnown RBP11.22□□□□□ -0.61
ABCF1-206ENST00000479542 IGKV1D-43A0A0B4J1Z2 117 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 LOC100653049A0A140TA62 436 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 BBIP1A8MTZ0 92 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 TRAPPC2LH3BP13 241 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 KPNA4O00629 521 aaPredicted RBP11.21□□□□□ -0.61
ABCF1-206ENST00000479542 MRASO14807 208 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 SURF4O15260 269 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 KRT34O76011 436 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 SLC2A10O95528 541 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 NGFP01138 241 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 NPPAP01160 153 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 GSTM3P21266 225 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 TNFSF4P23510 183 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 CDAP32320 146 aa11.21□□□□□ -0.61
ABCF1-206ENST00000479542 RPL27P61353 136 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms