RNA–Protein interactions for RNA: ENST00000478349.6

SMARCE1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-209ENST00000478349 ADH4P08319 380 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 RPL4P36578 427 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 LMO4P61968 165 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 PPP1CBP62140 327 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 PSG4Q00888 419 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 LAPTM4AQ15012 233 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 TSTQ16762 297 aaKnown RBP12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 IFI44LQ53G44 452 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 HSP90B2PQ58FF3 399 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 C12orf54Q6X4T0 127 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 FKBP9P1Q75LS8 142 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 NRMQ8IXM6 262 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 KLF14Q8TD94 323 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 IPCEF1Q8WWN9 437 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 ACOT11Q8WXI4 607 aaPredicted RBP12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 TSPAN32Q96QS1 320 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 ANKRD19PQ9H560 264 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 WIPI2Q9Y4P8 454 aa12.31□□□□□ -0.44
SMARCE1-209ENST00000478349 ISPDA4D126 451 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 TRIM77I1YAP6 450 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 SPRY3O43610 288 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 TIMM8AO60220 97 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 PIP5K1CO60331 668 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 CCDC22O60826 627 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 ABHD16AO95870 558 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 COX5BP10606 129 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 LAP3P28838 519 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 ACTG1P63261 375 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 SRSF2Q01130 221 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 SPATA46Q5T0L3 261 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 AVPI1Q5T686 147 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 DCAF12L2Q5VW00 463 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 USP43Q70EL4 1123 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 ZNF101Q8IZC7 436 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 FAM156AQ8NDB6 213 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 OR51A7Q8NH64 312 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 AKR7LQ8NHP1 331 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 SLC25A40Q8TBP6 338 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 ST7LQ8TDW4 575 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 CCL17Q92583 94 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 RCN3Q96D15 328 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 MARS2Q96GW9 593 aaKnown RBP12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 C4orf45Q96LM5 186 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 HOPXQ9BPY8 73 aaPredicted RBP12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 SUCNR1Q9BXA5 334 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 OR2J1Q9GZK6 312 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 A4GNTQ9UNA3 340 aa12.3□□□□□ -0.44
SMARCE1-209ENST00000478349 YLPM1P49750 1951 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 LOC100509620A0A075B734 347 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 TRAV27A0A087WT01 109 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 J3QW42 95 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 CXCR6O00574 342 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 SURF4O15260 269 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 GMNNO75496 209 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 IGHV1-46P01743 117 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 IGHV2-5P01817 119 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 TNFRSF1AP19438 455 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 EPHA1P21709 976 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 WNT5AP41221 380 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 LIMS1P48059 325 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 MMP15P51511 669 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 PRKCDQ05655 676 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 MTX3Q5HYI7 312 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 FOXL2NBQ6ZUU3 175 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 RFPL4BQ6ZWI9 263 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 MBOAT2Q6ZWT7 520 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 NANPQ8TBE9 248 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 ZNF570Q96NI8 536 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 RBM4Q9BWF3 364 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 WNT5BQ9H1J7 359 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 MAN2C1Q9NTJ4 1040 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 PCDHB10Q9UN67 800 aa12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 FAM32AQ9Y421 112 aaKnown RBP12.29□□□□□ -0.44
SMARCE1-209ENST00000478349 WNT9BO14905 357 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 DOK2O60496 412 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 CD55P08174 381 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 CD14P08571 375 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 MAKP20794 623 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 HTR5AP47898 357 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 TNFAIP6P98066 277 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 LIPEQ05469 1076 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 AQP6Q13520 282 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 ZBED5Q49AG3 693 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 GPR139Q6DWJ6 353 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 C1QL2Q7Z5L3 287 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 ADCK1Q86TW2 530 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 IGFN1Q86VF2 1251 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 SPICQ8N5J4 248 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 OR13C2Q8NGS9 318 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 FAM162AQ96A26 154 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 ZMYND19Q96E35 227 aaPredicted RBP12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 EFCAB1Q9HAE3 211 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 POLE4Q9NR33 117 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 TBCCD1Q9NVR7 557 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 ATPIF1Q9UII2 106 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 RPS6KA6Q9UK32 745 aa12.28□□□□□ -0.44
SMARCE1-209ENST00000478349 IGKV1D-43A0A0B4J1Z2 117 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 ZSCAN5BA6NJL1 495 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 SGCEO43556 437 aa12.27□□□□□ -0.45
SMARCE1-209ENST00000478349 PLPP2O43688 288 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms