RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 NPY4RP50391 375 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 BIDP55957 195 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 ARF6P62330 175 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 PUDPQ08623 228 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 ZNF181Q2M3W8 571 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 RUNDC3AQ59EK9 446 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 CFAP157Q5JU67 520 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 C6orf136Q5SQH8 315 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 FAM201AQ5SY85 155 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 LCE2DQ5TA82 110 aaPredicted RBP6□□□□□ -1.45
SPTLC1-205ENST00000477888 IL23RQ5VWK5 629 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 C5orf46Q6UWT4 87 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 DCDC5Q6ZRR9 648 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 ZER1Q7Z7L7 766 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 SERPINA11Q86U17 422 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 PEX5LQ8IYB4 626 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 OR8J2Q8NGG1 315 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 OR4A15Q8NGL6 344 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 OR6S1Q8NH40 331 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 OR52P1PQ8NH57 321 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 OR6X1Q8NH79 312 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 OR2T6Q8NHC8 308 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 SLC38A4Q969I6 547 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 PPP3R2Q96LZ3 170 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 MAGEB18Q96M61 343 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 ZNF607Q96SK3 696 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 C1orf50Q9BV19 199 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 C12orf10Q9HB07 376 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 SERTAD4Q9NUC0 356 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 ZDHHC18Q9NUE0 388 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 UTP11Q9Y3A2 253 aaKnown RBP6□□□□□ -1.45
SPTLC1-205ENST00000477888 FIS1Q9Y3D6 152 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 MAB21L2Q9Y586 359 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 SAR1BQ9Y6B6 198 aa6□□□□□ -1.45
SPTLC1-205ENST00000477888 NUP214P35658 2090 aaPredicted RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 PRSS51A0A1B0GVH4 220 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 TMEM233B4DJY2 109 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 J3QW42 95 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 DUS4LO95620 317 aaKnown RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 CHEK2O96017 543 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 BGLAPP02818 100 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 OPN1SWP03999 348 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 QDPRP09417 244 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 G6PDP11413 515 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 KITLGP21583 273 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 GCAP28676 217 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 HOXD3P31249 432 aaPredicted RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 CRATP43155 626 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 GDI2P50395 445 aaKnown RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 ANXA11P50995 505 aaKnown RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 CLDN8P56748 225 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 HOXC5Q00444 222 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 HSF2Q03933 536 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 DCTN2Q13561 401 aaKnown RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 HIST3H3Q16695 136 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 LIN52Q52LA3 116 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 RNF220Q5VTB9 566 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 CRIP3Q6Q6R5 217 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 ANKRD46Q86W74 232 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 LRRC18Q8N456 261 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 PNLDC1Q8NA58 520 aaKnown RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 SPATA4Q8NEY3 305 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 OR4C13Q8NGP0 309 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 AKR7LQ8NHP1 331 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 TWIST2Q8WVJ9 160 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 ZNF566Q969W8 418 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 SLC25A44Q96H78 314 aaPredicted RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 RCC1LQ96I51 464 aaKnown RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 C3orf30Q96M34 536 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 MOGAT1Q96PD6 335 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 RANBP3Q9H6Z4 567 aaPredicted RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 MRPL39Q9NYK5 338 aaKnown RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 MARCOQ9UEW3 520 aaPredicted RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 TBK1Q9UHD2 729 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 CAB39Q9Y376 341 aaPredicted RBP5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 CSMD3Q7Z407 3707 aa5.99□□□□□ -1.45
SPTLC1-205ENST00000477888 LRRN3E7EW58 273 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 ANGPTL7O43827 346 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 FCN3O75636 299 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 SERPINI2O75830 405 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 CPSF4O95639 269 aaKnown RBP5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 PROCP04070 461 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 PGA4P0DJD7 388 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 PGA3P0DJD8 388 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 NR2F1P10589 423 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 LYL1P12980 280 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 ZNF32P17041 273 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 GNALP38405 381 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 SLC35A2P78381 396 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 TXNL4AP83876 142 aaKnown RBP5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 PSG4Q00888 419 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 CDONQ4KMG0 1287 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 METAP1DQ6UB28 335 aaPredicted RBP5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 SLC35D2Q76EJ3 337 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 IGFN1Q86VF2 1251 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 LSMEM1Q8N8F7 131 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 FNDC5Q8NAU1 212 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 ACMSDQ8TDX5 336 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 MCHR2Q969V1 340 aa5.98□□□□□ -1.45
SPTLC1-205ENST00000477888 TUBGCP3Q96CW5 907 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms