RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	UBTFL6	P0CB48	400 aa	Predicted RBP	2.55	□□□□□ -2
RBM39-231	ENST00000477334	PTN	P21246	168 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	U2AF2	P26368	475 aa	Known RBP eCLIP	2.55	□□□□□ -2	5e-8	■■■□□ 17
RBM39-231	ENST00000477334	STOM	P27105	288 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	FOXN2	P32314	431 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	SLC1A2	P43004	574 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	UBE2A	P49459	152 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	SUB1	P53999	127 aa	Known RBP eCLIP	2.55	□□□□□ -2
RBM39-231	ENST00000477334	IRX3	P78415	501 aa	Predicted RBP	2.55	□□□□□ -2
RBM39-231	ENST00000477334	HMGCS1	Q01581	520 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	EIF4G1	Q04637	1599 aa	Known RBP	2.55	□□□□□ -2
RBM39-231	ENST00000477334	SLA	Q13239	276 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	PPIL2	Q13356	520 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	BEX5	Q5H9J7	111 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	REEP3	Q6NUK4	255 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	LINC00173	Q6ZV60	143 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	NIPA1	Q7RTP0	329 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	PCP2	Q8IVA1	136 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	PUSL1	Q8N0Z8	303 aa	Known RBP	2.55	□□□□□ -2
RBM39-231	ENST00000477334	OR2G2	Q8NGZ5	317 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	MITD1	Q8WV92	249 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	GEMIN6	Q8WXD5	167 aa	Known RBP	2.55	□□□□□ -2
RBM39-231	ENST00000477334	C8orf44	Q96CB5	159 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	RARRES2	Q99969	163 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	GABARAPL3	Q9BY60	117 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	TDRD3	Q9H7E2	651 aa	Known RBP	2.55	□□□□□ -2
RBM39-231	ENST00000477334	LHX9	Q9NQ69	397 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	DYRK4	Q9NR20	520 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	MTCH1	Q9NZJ7	389 aa		2.55	□□□□□ -2
RBM39-231	ENST00000477334	COL4A4	P53420	1690 aa	Predicted RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	CDHR2	Q9BYE9	1310 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	IGKV2-28	A0A075B6P5	120 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	LOC100506127	A0A0U1RQW1	187 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334		A0A1B0GVI7	797 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334		A0A1W2PPV9	198 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	CIB4	A0PJX0	185 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	PLAC8L1	A1L4L8	177 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	SERPINE3	A8MV23	424 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	ZNF879	B4DU55	563 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	ERVV-1	B6SEH8	477 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	SIRPB1	O00241	398 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	GOSR2	O14653	212 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	BCKDK	O14874	412 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	POLR3G	O15318	223 aa	Predicted RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	ANGPTL7	O43827	346 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	C1orf105	O95561	183 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	PAH	P00439	452 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	IGKV2D-28	P01615	120 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	BGLAP	P02818	100 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	C2	P06681	752 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	SRM	P19623	302 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	BCKDHB	P21953	392 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	SLC1A1	P43005	524 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	YAP1	P46937	504 aa	Known RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	TFPI2	P48307	235 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	MRPL19	P49406	292 aa	Known RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	TMED10	P49755	219 aa	Known RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	NCBP2	P52298	156 aa	Known RBP eCLIP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	RPS21	P63220	83 aa	Known RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334		Q3ZCU0	254 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	NKAIN1	Q4KMZ8	207 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	XKR4	Q5GH76	650 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	PPM1L	Q5SGD2	360 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	SASS6	Q6UVJ0	657 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	ZNF836	Q6ZNA1	936 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	LINC00523	Q86TU6	105 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	PQLC3	Q8N755	202 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	CYB561D1	Q8N8Q1	229 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	RHEBL1	Q8TAI7	183 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	ZFP90	Q8TF47	636 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	PIBF1	Q8WXW3	757 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	NRGN	Q92686	78 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	C19orf60	Q96EN9	201 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	BMF	Q96LC9	184 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	FOPNL	Q96NB1	174 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	SLC29A1	Q99808	456 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	TMEM59	Q9BXS4	323 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	IL22	Q9GZX6	179 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	C8orf33	Q9H7E9	229 aa	Predicted RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	LYRM4	Q9HD34	91 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	MRPS30	Q9NP92	439 aa	Known RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	ZC4H2	Q9NQZ6	224 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	ZNHIT6	Q9NWK9	470 aa	Known RBP	2.54	□□□□□ -2
RBM39-231	ENST00000477334	AHSP	Q9NZD4	102 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	FLVCR2	Q9UPI3	526 aa		2.54	□□□□□ -2
RBM39-231	ENST00000477334	CEMIP	Q8WUJ3	1361 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	KBTBD11-OT1	A0A1B0GTJ5	212 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	TMEM120B	A0PK00	339 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334		M0R3G1	203 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	CCL21	O00585	134 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	NDUFAB1	O14561	156 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	CLIC3	O95833	236 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	TGM6	O95932	706 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	FGG	P02679	453 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	CRYGC	P07315	174 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	IVL	P07476	585 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	ZDHHC11B	P0C7U3	371 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	UBC	P0CG48	685 aa	Known RBP	2.53	□□□□□ -2
RBM39-231	ENST00000477334	VHL	P40337	213 aa		2.53	□□□□□ -2
RBM39-231	ENST00000477334	CD151	P48509	253 aa		2.53	□□□□□ -2

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms