RNA–Protein interactions for RNA: ENST00000477289.1

NSMCE4A-208, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE4A, Length 643 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-208ENST00000477289 C1orf94Q6P1W5 598 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 TBPL2Q6SJ96 375 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 SMARCD3Q6STE5 483 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 KLHL17Q6TDP4 642 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 CREB3L2Q70SY1 520 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZBTB46Q86UZ6 589 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 COMTD1Q86VU5 262 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 CHERPQ8IWX8 916 aaKnown RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 CCDC36Q8IYA8 594 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 FAM86B1Q8N7N1 296 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 PNLDC1Q8NA58 520 aaKnown RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 AQP11Q8NBQ7 271 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 PAPD5Q8NDF8 572 aaKnown RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 PFN4Q8NHR9 129 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC7A13Q8TCU3 470 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 LIPHQ8WWY8 451 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 RNASE6Q93091 150 aaKnown RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 EME1Q96AY2 570 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 TMEM45BQ96B21 275 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 DUS3LQ96G46 650 aaKnown RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 CENPNQ96H22 339 aaPredicted RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC25A44Q96H78 314 aaPredicted RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 RITA1Q96K30 269 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF570Q96NI8 536 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC38A2Q96QD8 506 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 NPAS1Q99742 590 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 KCNS3Q9BQ31 491 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 PRSS27Q9BQR3 290 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 MED18Q9BUE0 208 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 C9orf16Q9BUW7 83 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF426Q9BUY5 554 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 PTDSS2Q9BVG9 487 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 LINC00470Q9BZP3 86 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 UCK2Q9BZX2 261 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 C8orf4Q9NR00 106 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 KRT84Q9NSB2 600 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 TBC1D23Q9NUY8 699 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 TAS2R16Q9NYV7 291 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 MAGED1Q9Y5V3 778 aaPredicted RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 FLVCR1Q9Y5Y0 555 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 LYVE1Q9Y5Y7 322 aa3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 RP1L1Q8IWN7 2480 aaPredicted RBP3.96□□□□□ -1.78
NSMCE4A-208ENST00000477289 GTF3C1Q12789 2109 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZGRF1Q86YA3 2104 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 DNAJC13O75165 2243 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 KMT2BQ9UMN6 2715 aaPredicted RBP3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 IGKV1D-42A0A075B6H8 117 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 TRAV27A0A087WT01 109 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 TRBV4-1A0A0J9YWV2 114 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 A1L4Q6 167 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 NKX2-6A6NCS4 301 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 NPIPB13A6NJU9 1138 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 SNTNA6NMZ2 147 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF716A6NP11 495 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 A8MXE2 369 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 B4DXG7 233 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 NPIPB4C9JG80 1138 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 FTCDNL1E5RQL4 147 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 MS4A18H0YCH9 400 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 IMPA2O14732 288 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 FFAR1O14842 300 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ARHGEF9O43307 516 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 AHCYL1O43865 530 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 PIP5K1CO60331 668 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 TMCC2O75069 709 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 WISP2O76076 250 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 GOSR1O95249 250 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 PTHP01270 115 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 SEMG1P04279 462 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 HMGN1P05114 100 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 CD14P08571 375 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ASAH2BP0C7U1 165 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 APEHP13798 732 aaKnown RBP3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ACADSP16219 412 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ZNF3P17036 446 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 CRABP1P29762 137 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ACVR1BP36896 505 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 AQP2P41181 271 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 OR3A2P47893 321 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 BLVRAP53004 296 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 RPL27P61353 136 aaKnown RBP3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ESRRGP62508 458 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 NKX6-1P78426 367 aaPredicted RBP3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ADORA2A-AS1P86434 159 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 SORDQ00796 357 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 ROR2Q01974 943 aaKnown RBP3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 RPL18Q07020 188 aaKnown RBP3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 CAMK2DQ13557 499 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 CCNIQ14094 377 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 STK11Q15831 433 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 RFX4Q33E94 735 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 MS4A18Q3C1V0 323 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 SLC36A3Q495N2 470 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 THEM4Q5T1C6 240 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 CARD17Q5XLA6 110 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 AWAT2Q6E213 333 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 SHQ1Q6PI26 577 aaKnown RBP3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 UNQ6126/PRO20091Q6UXV3 157 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 WDR88Q6ZMY6 472 aa3.95□□□□□ -1.78
NSMCE4A-208ENST00000477289 MEX3BQ6ZN04 569 aaKnown RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms