RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 C11orf98E9PRG8 122 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 H7C2Y5 167 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 M0QXV9 152 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ETV2O00321 342 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 PLPP1O14494 284 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ACOX3O15254 700 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 EFNA2O43921 213 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF623O75123 536 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 RBMXL2O75526 392 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GPX5O75715 221 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OR7A10O76100 309 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 RCBTB2O95199 551 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OXSR1O95747 527 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 LSM8O95777 96 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ANGPTL1O95841 491 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ACTL6AO96019 429 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 JCHAINP01591 159 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 UMODP07911 640 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 HOXB7P09629 217 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TACSTD2P09758 323 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 FGF3P11487 239 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GFAPP14136 432 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 MGMTP16455 207 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 WT1P19544 449 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ZP3P21754 424 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 EDNRAP25101 427 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ZFP36P26651 326 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CALML3P27482 149 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 PSMB5P28074 263 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 C21orf33P30042 268 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 FGF9P31371 208 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SSTR4P31391 388 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 LEPP41159 167 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 MAGEA3P43357 314 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 XCR1P46094 333 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SLCO1A2P46721 670 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TFPI2P48307 235 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 HLCSP50747 726 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SSR4P51571 173 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 AP2S1P53680 142 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 B3GALT5-AS1P59052 145 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 UBE2MP61081 183 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CCL7P80098 99 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TLE4Q04727 773 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CKAP4Q07065 602 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 C2orf80Q0P641 193 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 BNIP2Q12982 314 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GAGE5Q13069 117 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GAGE6Q13070 117 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TRAF3Q13114 568 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GPR17Q13304 367 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 DPYSL3Q14195 570 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 FLOT2Q14254 428 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 KIR2DS3Q14952 304 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 EMC2Q15006 297 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 MAD2L1BPQ15013 274 aaPredicted RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OXA1LQ15070 435 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CALCRLQ16602 461 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GUK1Q16774 197 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 DUSP7Q16829 419 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TRIM16LQ309B1 348 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TRMT5Q32P41 509 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ACTBL2Q562R1 376 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GCSAMLQ5JQS6 135 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SPANXN4Q5MJ08 99 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 MARCH8Q5T0T0 291 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 LPCAT4Q643R3 524 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 DUPD1Q68J44 220 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF787Q6DD87 383 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ARMCX5Q6P1M9 558 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 RTL4Q6ZR62 310 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 Q6ZSR3 168 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 Q6ZSV7 163 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 LINC00336Q6ZUF6 198 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 AHSA2Q719I0 299 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SMIM15Q7Z3B0 74 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 MRPL52Q86TS9 123 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 SLC47A2Q86VL8 602 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 HIPK1Q86Z02 1210 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 ZNF547Q8IVP9 402 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 GID4Q8IVV7 300 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 BBS7Q8IWZ6 715 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 C10orf67Q8IYJ2 551 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CYP4Z2PQ8N1L4 340 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 Q8N402 240 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 BPIFB2Q8N4F0 458 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 DNAJC22Q8N4W6 341 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 MS4A15Q8N5U1 240 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TMEM156Q8N614 296 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TMEM251Q8N6I4 163 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CCDC71LQ8N9Z2 235 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OR5B17Q8NGF7 314 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OR5M1Q8NGP8 315 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OR6F1Q8NGZ6 308 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 OR5K2Q8NHB8 316 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 CCDC26Q8TAB7 109 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 TFB1MQ8WVM0 346 aaKnown RBP2.47□□□□□ -2.01
HMGN4-202ENST00000477243 PYDC1Q8WXC3 89 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 BAALCQ8WXS3 180 aa2.47□□□□□ -2.01
HMGN4-202ENST00000477243 FAM168AQ92567 244 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms