RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 A0A1B0GTI1 187 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 hCG_38984A0A1B0GV85 526 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 A0A1W2PPE3 182 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C1orf226A1L170 272 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TMEM89A2RUT3 159 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 GMNCA6NCL1 334 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 NEMP2A6NFY4 417 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CCDC160A6NGH7 325 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 EIF4E1BA6NMX2 242 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 A8MU76 341 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MPTX1A8MV57 137 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR11H12B2RN74 326 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 USP17L23D6RBM5 183 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PPIAL4DF5H284 164 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 KRTAP4-16G5E9R7 235 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 H3BNH8 94 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 M0R036 132 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SULT1C2O00338 296 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PDXKO00764 312 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TP53I11O14683 189 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CTDSPLO15194 276 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SIGLEC5O15389 551 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TGOLN2O43493 480 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 XRCC2O43543 280 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR1F1O43749 312 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TIMM8AO60220 97 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR10H2O60403 315 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FCGR3BO75015 233 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CREG1O75629 220 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RP2O75695 350 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR2J2O76002 312 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 WISP2O76076 250 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SUPT7LO94864 414 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 GLSO94925 669 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 AP2A2O94973 939 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 OR6A2O95222 327 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CLDN9O95484 217 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 AP2A1O95782 977 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PTTG1O95997 202 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 IGHG4P01861 327 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C1QBP02746 253 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C2P06681 752 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CA3P07451 260 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PAEPP09466 180 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RAB40ALP0C0E4 278 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FRMD6-AS1P0C7T7 363 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ZNF806P0C7X5 589 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C1GALT1C1LP0DN25 315 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PPIAL4FP0DN26 164 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RRASP10301 218 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CPN1P15169 458 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MYOGP15173 224 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 IL7RP16871 459 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ZNF25P17030 456 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 NELFEP18615 380 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 IMPDH1P20839 514 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 SERPINA2P20848 420 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 LHCGRP22888 699 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FMO3P31513 532 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 S100A11P31949 105 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 DDOSTP39656 456 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PTGFRP43088 359 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MAGEA12P43365 314 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MAP2K4P45985 399 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PSMD8P48556 350 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 CSNK1A1P48729 337 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 XKP51811 444 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 HMGCS2P54868 508 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MAZP56270 477 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 VSX2P58304 361 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 ERVPABLB-1P60509 514 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RPS20P60866 119 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 IRX4P78413 519 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 LCN2P80188 198 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 RPL19P84098 196 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 SLC34A1Q06495 639 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ARHGAP1Q07960 439 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 FGL1Q08830 312 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TNK1Q13470 666 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PRPSAP1Q14558 356 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 KCNJ11Q14654 390 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 C16orf72Q14CZ0 275 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 PSG5Q15238 335 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TEAD2Q15562 447 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TRIP10Q15642 601 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 DLG2Q15700 870 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 MRPL23Q16540 153 aaKnown RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 CYP51A1Q16850 503 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TATDN3Q17R31 274 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 KCTD19Q17RG1 926 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 ZNF630Q2M218 657 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 SMIM21Q3B7S5 101 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 TMEM176BQ3YBM2 270 aaPredicted RBP2.11□□□□□ -2.07
XRN1-211ENST00000477237 VPS26BQ4G0F5 336 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 ACSM3Q53FZ2 586 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 HSD17B12Q53GQ0 312 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 UTF1Q5T230 341 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 LRIF1Q5T3J3 769 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 IDNKQ5T6J7 187 aa2.11□□□□□ -2.07
XRN1-211ENST00000477237 UBE2UQ5VVX9 321 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms