RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 SNAP29O95721 258 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 GPX2P18283 190 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TCN1P20061 433 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 ATP4BP51164 291 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 DAP3P51398 398 aaKnown RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 ARHGDIAP52565 204 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 LINC00310P59036 64 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TRIP10Q15642 601 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 CYP51A1Q16850 503 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF718Q3SXZ3 478 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 GTDC1Q4AE62 458 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 EPGNQ6UW88 154 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 NANOGNBQ7Z5D8 188 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 BPIFB2Q8N4F0 458 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 RBM15BQ8NDT2 890 aaKnown RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TMEM54Q969K7 222 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 AJUBAQ96IF1 538 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 C7orf26Q96N11 449 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 SH3GL1Q99961 368 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 POLR2J2Q9GZM3 115 aaKnown RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 POLR2J3Q9H1A7 115 aaKnown RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF665Q9H7R5 613 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 ZMAT3Q9HA38 289 aaKnown RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 SLC6A13Q9NSD5 602 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TMEM38BQ9NVV0 291 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 MED29Q9NX70 200 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 CCDC167Q9P0B6 97 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 LEF1Q9UJU2 399 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 RAB21Q9UL25 225 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 CHST2Q9Y4C5 530 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 IGKV1D-42A0A075B6H8 117 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 IGHV1-69-2A0A0G2JMI3 117 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TRAPPC13A5PLN9 417 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 NPIPB6E9PJ23 425 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 H3BSA7 217 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 ANGPT2O15123 496 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 MPZL1O95297 269 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 IFNA14P01570 189 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 C1QCP02747 245 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TUBG1P23258 451 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TNFSF4P23510 183 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 COL8A2P25067 703 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 CFPP27918 469 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 HTR2AP28223 471 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 IL2RGP31785 369 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 CRYBB2P43320 205 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 COMPP49747 757 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 CDH12P55289 794 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 UCP2P55851 309 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 MAGOHP61326 146 aaKnown RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TAF11Q15544 211 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 RNF151Q2KHN1 245 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 DCAF12L2Q5VW00 463 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 DYDC1Q8WWB3 177 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TXNDC15Q96J42 360 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 OR52B2Q96RD2 323 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 GPA33Q99795 319 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 NDEL1Q9GZM8 345 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 RACGAP1Q9H0H5 632 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 NARFLQ9H6Q4 476 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 SAP30LQ9HAJ7 183 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 ELOVL3Q9HB03 270 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TUBG2Q9NRH3 451 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 DDX28Q9NUL7 540 aaKnown RBP6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TREM2Q9NZC2 230 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 SEC14L4Q9UDX3 406 aa6.2□□□□□ -1.42
BRCA1-214ENST00000477152 TMEM89A2RUT3 159 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 LYNX1G3V0Z9 82 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 FOXH1O75593 365 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 MFN2O95140 757 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 HPRP00739 348 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 QDPRP09417 244 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 LYNX1P0DP58 116 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 HLA-DOBP13765 273 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF250P15622 560 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF81P51508 661 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 HILS1P60008 231 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 PCBD1P61457 104 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 FOXL1Q12952 345 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF124Q15973 351 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 ZNF74Q16587 644 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 AGKQ53H12 422 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 PHYHD1Q5SRE7 291 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 C1QL2Q7Z5L3 287 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 MYPOPQ86VE0 399 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-214ENST00000477152 SKA3Q8IX90 412 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 ICA1LQ8NDH6 482 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 OR9I1Q8NGQ6 314 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 SVIPQ8NHG7 77 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 ARHGDIGQ99819 225 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 WACQ9BTA9 647 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 OR10A2Q9H208 303 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 LPAR2Q9HBW0 351 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 ZDHHC8Q9ULC8 765 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 NDUFAF1Q9Y375 327 aa6.19□□□□□ -1.42
BRCA1-214ENST00000477152 IGLV3-9A0A075B6K5 115 aa6.18□□□□□ -1.42
BRCA1-214ENST00000477152 CH25HO95992 272 aa6.18□□□□□ -1.42
BRCA1-214ENST00000477152 IGF2P01344 180 aa6.18□□□□□ -1.42
BRCA1-214ENST00000477152 CPT2P23786 658 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms