RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CRLF2Q9HC73 371 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 CLN8Q9UBY8 286 aa3.79□□□□□ -1.8
VPS50-212ENST00000476413 COL22A1Q8NFW1 1626 aaPredicted RBP3.79□□□□□ -1.8
VPS50-212ENST00000476413 PRRC2AP48634 2157 aaKnown RBP3.79□□□□□ -1.8
VPS50-212ENST00000476413 MN1Q10571 1320 aaPredicted RBP3.78□□□□□ -1.8
VPS50-212ENST00000476413 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.78□□□□□ -1.8
VPS50-212ENST00000476413 KCNE1BA0A087WTH5 132 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 IGLV1-36A0A0B4J1U3 117 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 A0A1B0GW55 424 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 SMKR1H3BMG3 65 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 AQP8O94778 261 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 DUX4L2P0CJ85 424 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 DUX4L3P0CJ86 424 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 DUX4L5P0CJ88 424 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 DUX4L6P0CJ89 424 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 DUX4L7P0CJ90 424 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 OR1E1P30953 314 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 STXBP1P61764 594 aaKnown RBP3.78□□□□□ -1.8
VPS50-212ENST00000476413 MECOMQ03112 1051 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 XKR4Q5GH76 650 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 CCNJQ5T5M9 372 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 TWF2Q6IBS0 349 aaKnown RBP3.78□□□□□ -1.8
VPS50-212ENST00000476413 DNAJC24Q6P3W2 148 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 NCCRP1Q6ZVX7 275 aaPredicted RBP3.78□□□□□ -1.8
VPS50-212ENST00000476413 CMC1Q7Z7K0 106 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 COMMD1Q8N668 190 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 OR52E5Q8NH55 327 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 OR5K2Q8NHB8 316 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 ZFP90Q8TF47 636 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 PEX13Q92968 403 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 ANP32EQ9BTT0 268 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 ACTR3CQ9C0K3 210 aaPredicted RBP3.78□□□□□ -1.8
VPS50-212ENST00000476413 LYRM4Q9HD34 91 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 SLC40A1Q9NP59 571 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 SAMSN1Q9NSI8 373 aaKnown RBP3.78□□□□□ -1.8
VPS50-212ENST00000476413 AHSPQ9NZD4 102 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 DUX4Q9UBX2 424 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 KCNE3Q9Y6H6 103 aa3.78□□□□□ -1.8
VPS50-212ENST00000476413 CARMIL3Q8ND23 1372 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 IGLV11-55A0A075B6I3 123 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 LYRM9A8MSI8 78 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CASC3O15234 703 aaKnown RBP3.77□□□□□ -1.81
VPS50-212ENST00000476413 FKBP6O75344 327 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 RAB3DO95716 219 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CT45A6P0DMU7 189 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CT45A5P0DMU8 189 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CT45A7P0DMV0 189 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 OR5H8P0DN80 308 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CTRB1P17538 263 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CDKN2BP42772 138 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 EIF3EP60228 445 aaKnown RBP3.77□□□□□ -1.81
VPS50-212ENST00000476413 TRAM2Q15035 370 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 PTPN20Q4JDL3 420 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CT45A1Q5HYN5 189 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 Q6P435 159 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 MBOAT1Q6ZNC8 495 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 ABHD13Q7L211 337 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 TMEM150AQ86TG1 271 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 OAFQ86UD1 273 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 BBOF1Q8ND07 529 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 OR9G4Q8NGQ1 327 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CT45A3Q8NHU0 189 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 CREB3L1Q96BA8 519 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 GSDMAQ96QA5 445 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 ANKRD60Q9BZ19 345 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 UCK2Q9BZX2 261 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 PSME2Q9UL46 239 aa3.77□□□□□ -1.81
VPS50-212ENST00000476413 GOLGA8TH3BQL2 631 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 AIREO43918 545 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 TLX1NBP0CAT3 122 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 UBTFL6P0CB48 400 aaPredicted RBP3.76□□□□□ -1.81
VPS50-212ENST00000476413 STAG3L3P0CL85 134 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 EIF2S2P20042 333 aaKnown RBP3.76□□□□□ -1.81
VPS50-212ENST00000476413 SPAG1Q07617 926 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 MAB21L1Q13394 359 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 PRPSAP1Q14558 356 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 HES5Q5TA89 166 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 FBXW12Q6X9E4 464 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 CBLN2Q8IUK8 224 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 PCP2Q8IVA1 136 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 ZNF786Q8N393 782 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 C15orf56Q8N910 161 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 TTC29Q8NA56 475 aaPredicted RBP3.76□□□□□ -1.81
VPS50-212ENST00000476413 OR56A4Q8NGH8 313 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 OR10G4Q8NGN3 311 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 ZNF596Q8TC21 504 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 ECHDC3Q96DC8 303 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 SEH1LQ96EE3 360 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 CEP170P1Q96L14 293 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 ZNF285Q96NJ3 590 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 BEX1Q9HBH7 125 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 CCNB1IP1Q9NPC3 277 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 TMEM9BQ9NQ34 198 aa3.76□□□□□ -1.81
VPS50-212ENST00000476413 NCBP2LA6PVI3 153 aaKnown RBP3.75□□□□□ -1.81
VPS50-212ENST00000476413 SUPT3HB4E1H0 165 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 AKR7A2O43488 359 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 CCNB2O95067 398 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 OXTP01178 125 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 FABP3P05413 133 aa3.75□□□□□ -1.81
VPS50-212ENST00000476413 TUBG1P23258 451 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms