RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 ETV6P41212 452 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 RGS19P49795 217 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PER3P56645 1201 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 MLF1P58340 268 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CLRN1P58418 232 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 FOXK1P85037 733 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PHLDA2Q53GA4 152 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF628Q5EBL2 1059 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TRIM61Q5EBN2 209 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 AADACL4Q5VUY2 407 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 STAC2Q6ZMT1 411 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF767PQ75MW2 155 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TRAPPC6BQ86SZ2 158 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM217Q8N7C4 229 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 MFSD9Q8NBP5 474 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 GOT1L1Q8NHS2 421 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 RGP1Q92546 391 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 FAM3DQ96BQ1 224 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SLC41A2Q96JW4 573 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CDCA3Q99618 268 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 VRK1Q99986 396 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ADGRL4Q9HBW9 690 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PDE7BQ9NP56 450 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CMC2Q9NRP2 79 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 NPFFR2Q9Y5X5 522 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 POLQO75417 2590 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 NLRC5Q86WI3 1866 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TEX51A0A1B0GUA7 166 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM82A0PJX8 343 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PMS2P1A4D2B8 440 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 SERINC4A6NH21 518 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 IFITM5A6NNB3 132 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF726A6NNF4 738 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF850A8MQ14 1090 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 LEUTXA8MZ59 168 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 H7C2Y5 167 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 RAB27BO00194 218 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 IGKV1D-16P01601 117 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 DBHP09172 617 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PVALBP20472 110 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 BMP5P22003 454 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 NRG3P56975 720 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CCINQ13939 588 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CDK5R1Q15078 307 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TGIF1Q15583 401 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ACKR1Q16570 336 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 C2orf76Q3KRA6 126 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZBTB37Q5TC79 503 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF550Q7Z398 422 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 MUC20Q8N307 709 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 GTPBP8Q8N3Z3 284 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TMIEQ8NEW7 156 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 POP5Q969H6 163 aaKnown RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 YIPF5Q969M3 257 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 TRAF4Q9BUZ4 470 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CST11Q9H112 138 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 IL20Q9NYY1 176 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 THAP10Q9P2Z0 257 aaPredicted RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 CTSFQ9UBX1 484 aa4.52□□□□□ -1.69
CCDC39-204ENST00000476379 LSM2Q9Y333 95 aaKnown RBP4.52□□□□□ -1.69
CCDC39-204ENST00000476379 PKD1L2Q7Z442 2459 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 C17orf113A0A1B0GUU1 675 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 C3orf80F5H4A9 247 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 BRINP1O60477 761 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 UTS2O95399 124 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 LPLP06858 475 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 RBMS1P29558 406 aaKnown RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 P2RX1P51575 399 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 CAV2P51636 162 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 GPR143P51810 404 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 BIDP55957 195 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 SLC26A5P58743 744 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 TAS2R43P59537 309 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 OR2B8PP59922 312 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ACTA2P62736 377 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ACTG2P63267 376 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ACTC1P68032 377 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ACTA1P68133 377 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 CSNK2A1P68400 391 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 SGCBQ16585 318 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 FXNQ16595 210 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 LTC4SQ16873 150 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 TUSC1Q2TAM9 212 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 TMEM176BQ3YBM2 270 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 YIF1BQ5BJH7 314 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 STEAP1BQ6NZ63 245 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 CBLN2Q8IUK8 224 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 PLPP6Q8IY26 295 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 BCORP1Q8N888 145 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 CSNK2A3Q8NEV1 391 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 OR4K17Q8NGC6 315 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ZBTB8AQ96BR9 441 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 LRRC46Q96FV0 321 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF845Q96IR2 970 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 NUDT16L1Q9BRJ7 211 aaKnown RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 ZNF649Q9BS31 505 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 GSX2Q9BZM3 304 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 POLMQ9NP87 494 aaPredicted RBP4.51□□□□□ -1.69
CCDC39-204ENST00000476379 SCP2D1Q9UJQ7 156 aa4.51□□□□□ -1.69
CCDC39-204ENST00000476379 PCDHGA5Q9Y5G8 931 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms