RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 AQP6Q13520 282 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 ZMYND11Q15326 602 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 ZNF77Q15935 545 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 KCTD19Q17RG1 926 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-211ENST00000476215 TMEM255AQ5JRV8 349 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 PHYHD1Q5SRE7 291 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 ZNF691Q5VV52 312 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 PUSL1Q8N0Z8 303 aaKnown RBP3.04□□□□□ -1.92
PTCD3-211ENST00000476215 SGK3Q96BR1 496 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 AURKBQ96GD4 344 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-211ENST00000476215 C12orf42Q96LP6 360 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 GCOM2Q9BZD3 368 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-211ENST00000476215 COA1Q9GZY4 146 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 TPK1Q9H3S4 243 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 TM9SF3Q9HD45 589 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 TBX21Q9UL17 535 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 PEX16Q9Y5Y5 336 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 ARFGEF2Q9Y6D5 1785 aa3.04□□□□□ -1.92
PTCD3-211ENST00000476215 COL4A4P53420 1690 aaPredicted RBP3.04□□□□□ -1.92
PTCD3-211ENST00000476215 TIAM2Q8IVF5 1701 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 IGLV11-55A0A075B6I3 123 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 IGKV1D-13A0A0B4J2D9 117 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 CD5LO43866 347 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 C1orf105O95561 183 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 IGLV2-23P01705 113 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 IGHV2-5P01817 119 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 IGKV1-13P0DP09 117 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 ZNF30P17039 623 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 RPS9P46781 194 aaKnown RBP3.03□□□□□ -1.92
PTCD3-211ENST00000476215 CDH4P55283 916 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 PFN3P60673 137 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 KCTD21Q4G0X4 260 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 C6orf226Q5I0X4 101 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 KHDRBS2Q5VWX1 349 aaKnown RBP3.03□□□□□ -1.92
PTCD3-211ENST00000476215 PSTKQ8IV42 348 aaKnown RBP3.03□□□□□ -1.92
PTCD3-211ENST00000476215 SDR9C7Q8NEX9 313 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 ZNF596Q8TC21 504 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 ACTRT1Q8TDG2 376 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 GEMIN6Q8WXD5 167 aaKnown RBP3.03□□□□□ -1.92
PTCD3-211ENST00000476215 STMN2Q93045 179 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 ZBED3Q96IU2 234 aaPredicted RBP3.03□□□□□ -1.92
PTCD3-211ENST00000476215 RARRES2Q99969 163 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 TMEM59Q9BXS4 323 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 IFI27L2Q9H2X8 130 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 UGT1A7Q9HAW7 530 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 UGT1A10Q9HAW8 530 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 UGT1A8Q9HAW9 530 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 NT5MQ9NPB1 228 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 EXTL2Q9UBQ6 330 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 SUN2Q9UH99 717 aa3.03□□□□□ -1.92
PTCD3-211ENST00000476215 LAMB4A4D0S4 1761 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 ANKRD36CQ5JPF3 1778 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 ADAMTSL1Q8N6G6 1762 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 NFASCO94856 1347 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 TNRC18O15417 2968 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-211ENST00000476215 FAM240BA0A1B0GVZ2 78 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 ARHGEF35A5YM69 484 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 CCL21O00585 134 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 PSTPIP1O43586 416 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 SPAG7O75391 227 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 C2P06681 752 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 MX1P20591 662 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 VHLP40337 213 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 UBE2AP49459 152 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 ZNF136P52737 540 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 HMGCS1Q01581 520 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 PPIL2Q13356 520 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 GK3PQ14409 553 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 ARHGAP19Q14CB8 494 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 CTSL3PQ5NE16 218 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 IGFL3Q6UXB1 125 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 H2AFVQ71UI9 128 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 PCP2Q8IVA1 136 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 CD300LFQ8TDQ1 290 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 STARD8Q92502 1023 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 KCTD14Q9BQ13 255 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-211ENST00000476215 GABARAPL3Q9BY60 117 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 DEFB129Q9H1M3 183 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 CD209Q9NNX6 404 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 SLC7A8Q9UHI5 535 aa3.02□□□□□ -1.93
PTCD3-211ENST00000476215 F11RQ9Y624 299 aaKnown RBP3.02□□□□□ -1.93
PTCD3-211ENST00000476215 COL4A1P02462 1669 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 LRP4O75096 1905 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 MED23Q9ULK4 1368 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 MYO3BQ8WXR4 1341 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 DUOX1Q9NRD9 1551 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 MYO10Q9HD67 2058 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 PIKFYVEQ9Y2I7 2098 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 A0A1B0GVI7 797 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 A0A1W2PPE3 182 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 A0A1W2PPV9 198 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 CIB4A0PJX0 185 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 PLAC8L1A1L4L8 177 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 MED6O75586 246 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 BGLAPP02818 100 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 ZDHHC11BP0C7U3 371 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 TFPI2P48307 235 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 TPMTP51580 245 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 CCR8P51685 355 aa3.01□□□□□ -1.93
PTCD3-211ENST00000476215 UGT2B15P54855 530 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms