RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 ZNF283Q8N7M2 679 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 OR4D11Q8NGI4 311 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 NABP1Q96AH0 204 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 NKIRAS1Q9NYS0 192 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.21■□□□□ 0.35
VPS36-203ENST00000475375 GMEB1Q9Y692 573 aa17.21■□□□□ 0.35
VPS36-203ENST00000475375 V9GYY5 206 aaPredicted RBP17.21■□□□□ 0.35
VPS36-203ENST00000475375 CMYA5Q8N3K9 4069 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 A8MXK9 166 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 FUT1P19526 365 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 GSTM3P21266 225 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 CD80P33681 288 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 ZNF133P52736 654 aaPredicted RBP17.2■□□□□ 0.34
VPS36-203ENST00000475375 PCBP3P57721 371 aaKnown RBP17.2■□□□□ 0.34
VPS36-203ENST00000475375 PAX8Q06710 450 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 SRSF4Q08170 494 aaKnown RBP17.2■□□□□ 0.34
VPS36-203ENST00000475375 PSG7Q13046 419 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 CDK5R2Q13319 367 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 ARL9Q6T311 187 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 EPGNQ6UW88 154 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 BTNL3Q6UXE8 466 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 TSPYL5Q86VY4 417 aaPredicted RBP17.2■□□□□ 0.34
VPS36-203ENST00000475375 SLC26A7Q8TE54 656 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 C4orf45Q96LM5 186 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 SAMD8Q96LT4 415 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 CCT8L2Q96SF2 557 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 CPPED1Q9BRF8 314 aaPredicted RBP17.2■□□□□ 0.34
VPS36-203ENST00000475375 WNT5BQ9H1J7 359 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 SMURF2Q9HAU4 748 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 MEPEQ9NQ76 525 aaPredicted RBP17.2■□□□□ 0.34
VPS36-203ENST00000475375 TNFRSF19Q9NS68 423 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 PPP1R3CQ9UQK1 317 aa17.2■□□□□ 0.34
VPS36-203ENST00000475375 IGKV1D-43A0A0B4J1Z2 117 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 TRAV40A0A0B4J280 105 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 MDFIC2A0A1B0GVS7 189 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 GMNCA6NCL1 334 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 F5H0A9 414 aaPredicted RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 HOXA3O43365 443 aaPredicted RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 OR7A10O76100 309 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 ABHD16AO95870 558 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 CRYBA1P05813 215 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 NR2C1P13056 603 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 LAP3P28838 519 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 MDH2P40926 338 aaKnown RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 GUCA1AP43080 201 aaPredicted RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 MRPL19P49406 292 aaKnown RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 TOP3AQ13472 1001 aaPredicted RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 AGKQ53H12 422 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 ZNF774Q6NX45 483 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 CROCCP2Q86T23 111 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 PTOV1Q86YD1 416 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 MOSPD2Q8NHP6 518 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 PFN4Q8NHR9 129 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 ITLN1Q8WWA0 313 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 HDAC2Q92769 488 aaKnown RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 ZDHHC16Q969W1 377 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 ZNF426Q9BUY5 554 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 SSBP3Q9BWW4 388 aaPredicted RBP17.19■□□□□ 0.34
VPS36-203ENST00000475375 IL20RAQ9UHF4 553 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 LRCH1Q9Y2L9 728 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 TIMM10BQ9Y5J6 103 aa17.19■□□□□ 0.34
VPS36-203ENST00000475375 MT-ND1P03886 318 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 PCBD1P61457 104 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 ARMC4Q5T2S8 1044 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 FAM27BQ5VT28 67 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 LRRN1Q6UXK5 716 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 C9orf139Q6ZV77 190 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 MUC20Q8N307 709 aaPredicted RBP17.18■□□□□ 0.34
VPS36-203ENST00000475375 KIR3DL3Q8N743 410 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 SGTBQ96EQ0 304 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 BEX1Q9HBH7 125 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 MAN2C1Q9NTJ4 1040 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 PDP1Q9P0J1 537 aaPredicted RBP17.18■□□□□ 0.34
VPS36-203ENST00000475375 MMP24Q9Y5R2 645 aa17.18■□□□□ 0.34
VPS36-203ENST00000475375 A0A1B0GUS0 222 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 A0A1W2PPL8 197 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 CEACAM18A8MTB9 384 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 SURF4O15260 269 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 CST2P09228 141 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 RPS2P15880 293 aaKnown RBP17.17■□□□□ 0.34
VPS36-203ENST00000475375 BRICD5Q6PL45 260 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 WFDC12Q8WWY7 111 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 THOC1Q96FV9 657 aaKnown RBP17.17■□□□□ 0.34
VPS36-203ENST00000475375 PRSS27Q9BQR3 290 aa17.17■□□□□ 0.34
VPS36-203ENST00000475375 FAM181BA6NEQ2 426 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 ICMTO60725 284 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 PLATP00750 562 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 PPIAL4GP0DN37 164 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 RAG2P55895 527 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 MTPNP58546 118 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 GNB2P62879 340 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 LAPTM4AQ15012 233 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 OCLNQ16625 522 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 RUNDC3AQ59EK9 446 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 SLC25A47Q6Q0C1 308 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 Q6ZR03 302 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 PATL1Q86TB9 770 aaKnown RBP17.16■□□□□ 0.34
VPS36-203ENST00000475375 NPEPL1Q8NDH3 523 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 OR4F5Q8NH21 305 aa17.16■□□□□ 0.34
VPS36-203ENST00000475375 TMEM255BQ8WV15 326 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms