RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 KLHL21Q9UJP4 597 aa21.05■□□□□ 0.96
TMEM54-205ENST00000475208 KCNAB3O43448 404 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 PIP5K1CO60331 668 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 IGHV2-70P01814 119 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 CST2P09228 141 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 ARHGDIAP52565 204 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 TNFAIP6P98066 277 aaPredicted RBP21.04■□□□□ 0.96
TMEM54-205ENST00000475208 TAF11Q15544 211 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 ZNF774Q6NX45 483 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 RBMS3Q6XE24 437 aaKnown RBP21.04■□□□□ 0.96
TMEM54-205ENST00000475208 SIGLECL1Q8N7X8 197 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 DEFB108BQ8NET1 73 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 RBP7Q96R05 134 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 DCLRE1CQ96SD1 692 aaKnown RBP21.04■□□□□ 0.96
TMEM54-205ENST00000475208 ZNF747Q9BV97 191 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 PURGQ9UJV8 347 aaKnown RBP21.04■□□□□ 0.96
TMEM54-205ENST00000475208 HIF3AQ9Y2N7 669 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 TIMM10BQ9Y5J6 103 aa21.04■□□□□ 0.96
TMEM54-205ENST00000475208 TIMM8AO60220 97 aaPredicted RBP21.03■□□□□ 0.96
TMEM54-205ENST00000475208 SBK2P0C263 348 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 HKR1P10072 659 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 OR1E2P47887 323 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 FOXL1Q12952 345 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 ARMCX4Q5H9R4 360 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 MTX3Q5HYI7 312 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 RABL3Q5HYI8 236 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 NANOGP8Q6NSW7 305 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 POP5Q969H6 163 aaKnown RBP21.03■□□□□ 0.96
TMEM54-205ENST00000475208 C4orf45Q96LM5 186 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 ELOVL3Q9HB03 270 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 MMP26Q9NRE1 261 aa21.03■□□□□ 0.96
TMEM54-205ENST00000475208 TMPRSS2O15393 492 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 THRBP10828 461 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 RBMXP38159 391 aaKnown RBP21.02■□□□□ 0.96
TMEM54-205ENST00000475208 RPL27P61353 136 aaKnown RBP21.02■□□□□ 0.96
TMEM54-205ENST00000475208 PCBD1P61457 104 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 PRR31Q5SQ13 230 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 FOXL2NBQ6ZUU3 175 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 IGFN1Q86VF2 1251 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 CALHM3Q86XJ0 350 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 SPICQ8N5J4 248 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 FNDC8Q8TC99 324 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 ATP6V1G3Q96LB4 118 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 DUX5Q96PT3 197 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 TMEM106BQ9NUM4 274 aa21.02■□□□□ 0.96
TMEM54-205ENST00000475208 A0A1W2PPL8 197 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 FBP2O00757 339 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 IGHMP01871 453 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 GUCA1AP43080 201 aaPredicted RBP21.01■□□□□ 0.95
TMEM54-205ENST00000475208 PSG7Q13046 419 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 CDK5R2Q13319 367 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 CYLC2Q14093 348 aaPredicted RBP21.01■□□□□ 0.95
TMEM54-205ENST00000475208 ENDOGQ14249 297 aaKnown RBP21.01■□□□□ 0.95
TMEM54-205ENST00000475208 TUSC1Q2TAM9 212 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 TTMPQ5BVD1 217 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 SHISA2Q6UWI4 295 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 DOK3Q7L591 496 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 ZER1Q7Z7L7 766 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 LRRC58Q96CX6 371 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 ECSITQ9BQ95 431 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 C1QTNF5Q9BXJ0 243 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 ZNF69Q9UC07 566 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 EGFL7Q9UHF1 273 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 NUP50Q9UKX7 468 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 NDRG4Q9ULP0 352 aaKnown RBP21.01■□□□□ 0.95
TMEM54-205ENST00000475208 AUP1Q9Y679 476 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 PKD1L1Q8TDX9 2849 aa21.01■□□□□ 0.95
TMEM54-205ENST00000475208 DNAJC9-AS1A6NH13 148 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 ABHD16AO95870 558 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 IFI30P13284 250 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 CTXN1P60606 82 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 ZNF154Q13106 437 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 FAM205BPQ63HN1 556 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 ARL9Q6T311 187 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 KLHL36Q8N4N3 616 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 BPIFA2Q96DR5 249 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 SH3GL1Q99961 368 aa21■□□□□ 0.95
TMEM54-205ENST00000475208 PATZ1Q9HBE1 687 aaKnown RBP21■□□□□ 0.95
TMEM54-205ENST00000475208 INTS9Q9NV88 658 aaKnown RBP21■□□□□ 0.95
TMEM54-205ENST00000475208 TRAPPC2LH3BP13 241 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 FXYD1O00168 92 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 ZNF12P17014 697 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 GSTM3P21266 225 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 MSR1P21757 451 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 TNFSF4P23510 183 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 PRTN3P24158 256 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 SEC61A1P61619 476 aaKnown RBP20.99■□□□□ 0.95
TMEM54-205ENST00000475208 TMEM155Q4W5P6 130 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 KLF17Q5JT82 389 aaPredicted RBP20.99■□□□□ 0.95
TMEM54-205ENST00000475208 ZNF283Q8N7M2 679 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 LRRC75AQ8NAA5 344 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 OR2Z1Q8NG97 314 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 OR8J3Q8NGG0 315 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 POFUT1Q9H488 388 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 ZNF696Q9H7X3 374 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 PLEK2Q9NYT0 353 aa20.99■□□□□ 0.95
TMEM54-205ENST00000475208 POLR3KQ9Y2Y1 108 aaPredicted RBP20.99■□□□□ 0.95
TMEM54-205ENST00000475208 C12orf71A8MTZ7 269 aa20.98■□□□□ 0.95
TMEM54-205ENST00000475208 IFNA14P01570 189 aa20.98■□□□□ 0.95
TMEM54-205ENST00000475208 SLC6A9P48067 706 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms