RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ZDHHC6Q9H6R6 413 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 C3orf14Q9HBI5 128 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF160Q9HCG1 818 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 HHATLQ9HCP6 504 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 MMP17Q9ULZ9 603 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 ANGPT4Q9Y264 503 aa4.38□□□□□ -1.71
NPHP3-206ENST00000474871 EXOSC1Q9Y3B2 195 aaKnown RBP4.38□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM218A2RU14 115 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 YPEL1O60688 119 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CLIC3O95833 236 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 GBAP04062 536 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 UMODP07911 640 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 UNGP13051 313 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 STOMP27105 288 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SRD5A2P31213 254 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TFPI2P48307 235 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 RAB5CP51148 216 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 ACLYP53396 1101 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 MRPS10P82664 201 aaKnown RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SLC6A3Q01959 620 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SLC10A7Q0GE19 358 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 RABL3Q5HYI8 236 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 UTF1Q5T230 341 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 HENMT1Q5T8I9 393 aaKnown RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 RASSF6Q6ZTQ3 369 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 GLT6D1Q7Z4J2 308 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 KREMEN2Q8NCW0 462 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 OR5AK3PQ8NH89 298 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 COQ8BQ96D53 544 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 C1GALT1C1Q96EU7 318 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 YPEL2Q96QA6 119 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 DPH1Q9BZG8 443 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 ULBP1Q9BZM6 244 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CLMPQ9H6B4 373 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 NMRAL1Q9HBL8 299 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 NLE1Q9NVX2 485 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 EMCNQ9ULC0 261 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TIMM10BQ9Y5J6 103 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TIMM13Q9Y5L4 95 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 B3GALT1Q9Y5Z6 326 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 C7orf66A4D0T2 115 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 PHGDHO43175 533 aaKnown RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CGAP01215 116 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 F7P08709 466 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CELA3AP09093 270 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CXCL3P19876 107 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CSF2RBP32927 897 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 BTCP35070 178 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SEC61GP60059 68 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 RPL23AP62750 156 aaKnown RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 PITPNAQ00169 270 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 ST3GAL3Q11203 375 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 DGUOKQ16854 277 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SPATA31B1PQ5VZV4 182 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 EEF1DP3Q658K8 133 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 DNM1P34Q6PK57 102 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 ESPNLQ6ZVH7 1005 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TMEM192Q8IY95 271 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 ZNF676Q8N7Q3 588 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 KIR2DL5BQ8NHK3 375 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 GPA33Q99795 319 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 FICDQ9BVA6 458 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SPATA5L1Q9BVQ7 753 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TUBA4BQ9H853 241 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SSU72Q9NP77 194 aaKnown RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 G6PC2Q9NQR9 355 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 VPS29Q9UBQ0 182 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 FOXJ3Q9UPW0 622 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 KPTNQ9Y664 436 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TRAV39A0A0B4J263 110 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 FAM237BA0A1B0GVD1 139 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TCRBV3S1A0A5B6 114 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 UBFD1O14562 309 aaKnown RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 MRASO14807 208 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 FFAR3O14843 346 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 MYL12BO14950 172 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 GPR42O15529 346 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 HIST1H2ABP04908 130 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CD1DP15813 335 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 MYL12AP19105 171 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 TTPAP49638 278 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 HBA1P69905 142 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 ACVR1Q04771 509 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CRHR2Q13324 411 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 HERPUD1Q15011 391 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 NTRK2Q16620 822 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CTU2Q2VPK5 515 aaKnown RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 NSUN5P2Q63ZY6 315 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 DOK6Q6PKX4 331 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 C17orf99Q6UX52 265 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 C19orf35Q6ZS72 473 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 MOB3CQ70IA8 216 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 HIST3H2AQ7L7L0 130 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 SLC16A9Q7RTY1 509 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 GRASPQ7Z6J2 395 aaPredicted RBP4.37□□□□□ -1.71
NPHP3-206ENST00000474871 CD163Q86VB7 1156 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 BATF2Q8N1L9 274 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 BEST4Q8NFU0 473 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 OR5L2Q8NGL0 311 aa4.37□□□□□ -1.71
NPHP3-206ENST00000474871 OR5L1Q8NGL2 311 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms