RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 UGT2B15P54855 530 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 MTPNP58546 118 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 PPP1CBP62140 327 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 MRPS34P82930 218 aaKnown RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 TNFAIP6P98066 277 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 ZNF154Q13106 437 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 TAF11Q15544 211 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 ZMAT1Q5H9K5 638 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 C10orf128Q5T292 105 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 MBNL2Q5VZF2 373 aaKnown RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 DHDDSQ86SQ9 333 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 FITM2Q8N6M3 262 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 PFN4Q8NHR9 129 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 TAF15Q92804 592 aaKnown RBP eCLIP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 SLC25A28Q96A46 364 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 NABP1Q96AH0 204 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 MPP4Q96JB8 637 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 POM121L2Q96KW2 1035 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 C1orf147Q96MC9 270 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 ZNF48Q96MX3 618 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 MRPL13Q9BYD1 178 aaKnown RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 MEPEQ9NQ76 525 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 PLEK2Q9NYT0 353 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 CGGBP1Q9UFW8 167 aaPredicted RBP11.82□□□□□ -0.52
CCDC78-209ENST00000474647 EGFL7Q9UHF1 273 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 ZDHHC8Q9ULC8 765 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 GMEB1Q9Y692 573 aa11.82□□□□□ -0.52
CCDC78-209ENST00000474647 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 IGHV3OR16-10A0A075B7F0 116 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 PPIAL4CA0A0B4J2A2 164 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 CENPBD1B2RD01 187 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 PPIAL4FP0DN26 164 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 PRDX6P30041 224 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 LIPAP38571 399 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 AQP2P41181 271 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 PSG4Q00888 419 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 TOP3AQ13472 1001 aaPredicted RBP11.81□□□□□ -0.52
CCDC78-209ENST00000474647 SELPLGQ14242 412 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 MIDNQ504T8 468 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 RUNDC3AQ59EK9 446 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 KLF17Q5JT82 389 aaPredicted RBP11.81□□□□□ -0.52
CCDC78-209ENST00000474647 SPICQ8N5J4 248 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 DIRC2Q96SL1 478 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 SEPHS2Q99611 448 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 PRSS27Q9BQR3 290 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 ZNF426Q9BUY5 554 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 MS4A7Q9GZW8 240 aaPredicted RBP11.81□□□□□ -0.52
CCDC78-209ENST00000474647 STX18Q9P2W9 335 aaKnown RBP11.81□□□□□ -0.52
CCDC78-209ENST00000474647 UGT2A1Q9Y4X1 527 aa11.81□□□□□ -0.52
CCDC78-209ENST00000474647 IGKV1D-43A0A0B4J1Z2 117 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 A0A1W2PPL8 197 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 BBIP1A8MTZ0 92 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 OR7A10O76100 309 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 NGFP01138 241 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 MT-ND1P03886 318 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 RNASE1P07998 156 aaKnown RBP11.8□□□□□ -0.52
CCDC78-209ENST00000474647 COX4I1P13073 169 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 ZNF12P17014 697 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 FUT1P19526 365 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 ARHGDIAP52565 204 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 TAS2R41P59536 307 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 IL13RA1P78552 427 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 CYLC2Q14093 348 aaPredicted RBP11.8□□□□□ -0.52
CCDC78-209ENST00000474647 COQ5Q5HYK3 327 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 DLEU7Q6UYE1 221 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 TRPM8Q7Z2W7 1104 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 PATL1Q86TB9 770 aaKnown RBP11.8□□□□□ -0.52
CCDC78-209ENST00000474647 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 OR2Z1Q8NG97 314 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 MOSPD2Q8NHP6 518 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 RP9Q8TA86 221 aaKnown RBP11.8□□□□□ -0.52
CCDC78-209ENST00000474647 TMEM255BQ8WV15 326 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 HDAC2Q92769 488 aaKnown RBP11.8□□□□□ -0.52
CCDC78-209ENST00000474647 TAMM41Q96BW9 452 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 SGTBQ96EQ0 304 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 OR2H1Q9GZK4 316 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 NANOGQ9H9S0 305 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 PATZ1Q9HBE1 687 aaKnown RBP11.8□□□□□ -0.52
CCDC78-209ENST00000474647 TMEM106BQ9NUM4 274 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 OR5V1Q9UGF6 321 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 INSIG2Q9Y5U4 225 aa11.8□□□□□ -0.52
CCDC78-209ENST00000474647 ANGPT2O15123 496 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 GPANK1O95872 356 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 CD55P08174 381 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 ADH4P08319 380 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 NR2C1P13056 603 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 MDKP21741 143 aaPredicted RBP11.79□□□□□ -0.52
CCDC78-209ENST00000474647 TNFSF4P23510 183 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 LAP3P28838 519 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 ZNF133P52736 654 aaPredicted RBP11.79□□□□□ -0.52
CCDC78-209ENST00000474647 BTG1P62324 171 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 KRT72Q14CN4 511 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 ESCO2Q56NI9 601 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 MTX3Q5HYI7 312 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 ARMC4Q5T2S8 1044 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 ZNF774Q6NX45 483 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 LEG1Q6P5S2 330 aa11.79□□□□□ -0.52
CCDC78-209ENST00000474647 JAZF1Q86VZ6 243 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms