RNA–Protein interactions for RNA: ENST00000474432.1

COL7A1-209, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-209ENST00000474432 POLE4Q9NR33 117 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 DCAF13Q9NV06 445 aaKnown RBP15.82■□□□□ 0.12
COL7A1-209ENST00000474432 SIGLEC7Q9Y286 467 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 TIMM10BQ9Y5J6 103 aa15.82■□□□□ 0.12
COL7A1-209ENST00000474432 TRBV4-1A0A0J9YWV2 114 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 A0A1W2PPL8 197 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 ATP8B1O43520 1251 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 H1F0P07305 194 aaKnown RBP15.81■□□□□ 0.12
COL7A1-209ENST00000474432 MSR1P21757 451 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 CRYBB2P43320 205 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 GDI2P50395 445 aaKnown RBP15.81■□□□□ 0.12
COL7A1-209ENST00000474432 DVL1P1P54792 670 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-209ENST00000474432 SELENOVP59797 346 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 GLO1Q04760 184 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 RNF148Q8N7C7 305 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 ICA1LQ8NDH6 482 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 SLC25A40Q8TBP6 338 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 KLF14Q8TD94 323 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-209ENST00000474432 IPCEF1Q8WWN9 437 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-209ENST00000474432 GPA33Q99795 319 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 OR2J1Q9GZK6 312 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 NARFLQ9H6Q4 476 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 EMC7Q9NPA0 242 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 TMEFF2Q9UIK5 374 aaPredicted RBP15.81■□□□□ 0.12
COL7A1-209ENST00000474432 KLHL21Q9UJP4 597 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 RPS6KA6Q9UK32 745 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 CACNG2Q9Y698 323 aa15.81■□□□□ 0.12
COL7A1-209ENST00000474432 CDC14BO60729 498 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 DIRAS1O95057 198 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 SEMG1P04279 462 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 CTLA4P16410 223 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 RHCEP18577 417 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 PCGF3Q3KNV8 242 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 MBNL2Q5VZF2 373 aaKnown RBP15.8■□□□□ 0.12
COL7A1-209ENST00000474432 TMEM154Q6P9G4 183 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 SYT9Q86SS6 491 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 RASD2Q96D21 266 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 GPX7Q96SL4 187 aaPredicted RBP15.8■□□□□ 0.12
COL7A1-209ENST00000474432 SPAG4Q9NPE6 437 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 NRIP3Q9NQ35 241 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 TREM2Q9NZC2 230 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 GRHPRQ9UBQ7 328 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 GPR160Q9UJ42 338 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 TMEM5Q9Y2B1 443 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 TANC2Q9HCD6 1990 aa15.8■□□□□ 0.12
COL7A1-209ENST00000474432 PRSS37A4D1T9 235 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 ZSCAN5BA6NJL1 495 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 B4DSR2 109 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 PPIHO43447 177 aaKnown RBP15.79■□□□□ 0.12
COL7A1-209ENST00000474432 AHCYL1O43865 530 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 IGHV1-46P01743 117 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 RPL4P36578 427 aaKnown RBP15.79■□□□□ 0.12
COL7A1-209ENST00000474432 ZNF718Q3SXZ3 478 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 SPRNQ5BIV9 151 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 OTPQ5XKR4 325 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 CYP4Z1Q86W10 505 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 SNX33Q8WV41 574 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 POFUT1Q9H488 388 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 GORASP2Q9H8Y8 452 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 CD300AQ9UGN4 299 aa15.79■□□□□ 0.12
COL7A1-209ENST00000474432 IGHV1-69-2A0A0G2JMI3 117 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 TEX13CA0A0J9YWL9 993 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 C12orf71A8MTZ7 269 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 NDUFB2O95178 105 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 ADH4P08319 380 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 GAAP10253 952 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 HNF1AP20823 631 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 ZNF81P51508 661 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 PCBD1P61457 104 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 PPP1CBP62140 327 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 TSTQ16762 297 aaKnown RBP15.78■□□□□ 0.12
COL7A1-209ENST00000474432 PTCHD4Q6ZW05 846 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 USP51Q70EK9 711 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 ALDH16A1Q8IZ83 802 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 ABHD4Q8TB40 342 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 C4orf45Q96LM5 186 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 ZNF570Q96NI8 536 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 FAM107BQ9H098 131 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 ADA2Q9NZK5 511 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 VSX1Q9NZR4 365 aaPredicted RBP15.78■□□□□ 0.12
COL7A1-209ENST00000474432 EIF3KQ9UBQ5 218 aaKnown RBP15.78■□□□□ 0.12
COL7A1-209ENST00000474432 IL20RAQ9UHF4 553 aa15.78■□□□□ 0.12
COL7A1-209ENST00000474432 MPZL1O95297 269 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 TFP02787 698 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 COX5BP10606 129 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 HSD17B1P14061 328 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 SDHAP31040 664 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 MSX2P35548 267 aaPredicted RBP15.77■□□□□ 0.12
COL7A1-209ENST00000474432 HNRNPA0Q13151 305 aaKnown RBP15.77■□□□□ 0.12
COL7A1-209ENST00000474432 KRR1Q13601 381 aaKnown RBP15.77■□□□□ 0.12
COL7A1-209ENST00000474432 MOGQ16653 247 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 FGD3Q5JSP0 725 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 AVPI1Q5T686 147 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 RRM2BQ7LG56 351 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 RSRC1Q96IZ7 334 aaKnown RBP15.77■□□□□ 0.12
COL7A1-209ENST00000474432 WACQ9BTA9 647 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 SYT4Q9H2B2 425 aa15.77■□□□□ 0.12
COL7A1-209ENST00000474432 SAMD4AQ9UPU9 718 aaKnown RBP15.77■□□□□ 0.12
COL7A1-209ENST00000474432 H3BSA7 217 aa15.76■□□□□ 0.11
COL7A1-209ENST00000474432 SPRY3O43610 288 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms