RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PNCKQ6P2M8 343 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF585AQ6P3V2 769 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 RBM44Q6ZP01 1051 aaKnown RBP5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 DTX1Q86Y01 620 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 FGFRL1Q8N441 504 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 DNAJC22Q8N4W6 341 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 ZNF611Q8N823 705 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 DMBX1Q8NFW5 382 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 OR8U1Q8NH10 309 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 FAM110BQ8TC76 370 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 OR8B4Q96RC9 309 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 FOXB1Q99853 325 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 TMPRSS5Q9H3S3 457 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 RLIMQ9NVW2 624 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 CLN6Q9NWW5 311 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 ADAM29Q9UKF5 820 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 FBXO5Q9UKT4 447 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 STUB1Q9UNE7 303 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 ACTL7BQ9Y614 415 aa5.44□□□□□ -1.54
SMARCE1-208ENST00000474246 ABCB11O95342 1321 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 A0A1W2PRF3 423 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 A0A1W2PRM7 423 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 PRORSD1PA6NEY8 169 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 MYMKA6NI61 221 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 NPIPB5A8MRT5 1133 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 EFCAB9A8MZ26 197 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 MS4A18H0YCH9 400 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 TRAPPC2LH3BP13 241 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 K7ERU9 68 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 M0QYG6 137 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 M0QZ24 198 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 CLIC1O00299 241 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC16A5O15375 505 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 PDE6DO43924 150 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 CTSVO60911 334 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 SPAG7O75391 227 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 GAPDHP04406 335 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 C8GP07360 202 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 HOXB5P09067 269 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 DANCRP0C864 163 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 C8orf88P0DMB2 117 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 HIST1H1CP16403 213 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 OMGP23515 440 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 COL8A1P27658 744 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 OR3A1P47881 315 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 CDX1P47902 265 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 DNASE1L1P49184 302 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 SELENOTP62341 195 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 CXADRP78310 365 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 DLK1P80370 383 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 DEFB103AP81534 67 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 MVKQ03426 396 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 C2orf80Q0P641 193 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 HNRNPA0Q13151 305 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 TAB1Q15750 504 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 VMACQ2NL98 169 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 ARHGAP11BQ3KRB8 267 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 PLEKHN1Q494U1 663 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 WDR53Q7Z5U6 358 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 NLRX1Q86UT6 975 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 COMMD7Q86VX2 200 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 PARGQ86W56 976 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 CIR1Q86X95 450 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 UEVLDQ8IX04 471 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 C9orf62Q8N4C0 152 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 LILRA3Q8N6C8 439 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 METTL13Q8N6R0 699 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 KBTBD8Q8NFY9 601 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 SLC26A10Q8NG04 563 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 OR4S2Q8NH73 311 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 SAP25Q8TEE9 199 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 NPIPB3Q92617 1050 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 TRMT61AQ96FX7 289 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 TMEM19Q96HH6 336 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 HIST1H2AHQ96KK5 128 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 HIST1H2AJQ99878 128 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 CCDC32Q9BV29 185 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 C1QTNF5Q9BXJ0 243 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 HDHD5Q9BXW7 423 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 TBL1XR1Q9BZK7 514 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 SPRTNQ9H040 489 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 ALG9Q9H6U8 611 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 TXNRD2Q9NNW7 524 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 TRMT112Q9UI30 125 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 PURGQ9UJV8 347 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 NEU3Q9UQ49 428 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 AMDHD2Q9Y303 409 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 RBM7Q9Y580 266 aaKnown RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 RP1L1Q8IWN7 2480 aaPredicted RBP5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 NAV1Q8NEY1 1877 aa5.43□□□□□ -1.54
SMARCE1-208ENST00000474246 KIR2DL5BA0A0G2JN68 375 aa5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 KIR2DL5BA0A0G2JPC4 375 aa5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 PPP5D1E7EU14 171 aa5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 F5H5T6 163 aa5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 DCTN6O00399 190 aa5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 EIF4EBP3O60516 100 aaPredicted RBP5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 GPR75O95800 540 aa5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 HLA-AP01891 365 aaKnown RBP5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 BCHEP06276 602 aa5.42□□□□□ -1.54
SMARCE1-208ENST00000474246 ADH4P08319 380 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms