RNA–Protein interactions for RNA: ENST00000474036.1

FN1-219, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 1,058 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-219	ENST00000474036	ZNF404	Q494X3	552 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	MRPL2	Q5T653	305 aa	Known RBP	4.62	□□□□□ -1.67
FN1-219	ENST00000474036	SLC30A6	Q6NXT4	461 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	RPUSD3	Q6P087	351 aa	Known RBP	4.62	□□□□□ -1.67
FN1-219	ENST00000474036	SLC27A4	Q6P1M0	643 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	C1orf94	Q6P1W5	598 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	IGFL2	Q6UWQ7	119 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	HSDL2	Q6YN16	418 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	DGAT2L6	Q6ZPD8	337 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	RASSF6	Q6ZTQ3	369 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF554	Q86TJ5	538 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	RANBP3L	Q86VV4	465 aa	Predicted RBP	4.62	□□□□□ -1.67
FN1-219	ENST00000474036	CDC20B	Q86Y33	519 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	PRSS58	Q8IYP2	241 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	CYP4Z2P	Q8N1L4	340 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF619	Q8N2I2	560 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	BBS1	Q8NFJ9	593 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	OR52R1	Q8NGF1	315 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	OR9Q1	Q8NGQ5	310 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	OR2Y1	Q8NGV0	311 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	OR4Q3	Q8NH05	313 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	PRSS3P2	Q8NHM4	247 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	PFN4	Q8NHR9	129 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	WIPF2	Q8TF74	440 aa	Predicted RBP	4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ZFPM2	Q8WW38	1151 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ANKRD9	Q96BM1	317 aa	Predicted RBP	4.62	□□□□□ -1.67
FN1-219	ENST00000474036	OTULIN	Q96BN8	352 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	SAMD8	Q96LT4	415 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	LRFN5	Q96NI6	719 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	SLC38A2	Q96QD8	506 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	SDF2	Q99470	211 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	KCNS3	Q9BQ31	491 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	MND1	Q9BWT6	205 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	PIGU	Q9H490	435 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	UCK1	Q9HA47	277 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF160	Q9HCG1	818 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ANKH	Q9HCJ1	492 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	HHATL	Q9HCP6	504 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	FAM60A	Q9NP50	221 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	POLE4	Q9NR33	117 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	KLHL1	Q9NR64	748 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ABCB10	Q9NRK6	738 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	IL20RA	Q9UHF4	553 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	POMT2	Q9UKY4	750 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	SIRT4	Q9Y6E7	314 aa	Predicted RBP	4.62	□□□□□ -1.67
FN1-219	ENST00000474036	ABCA1	O95477	2261 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	KIAA1549	Q9HCM3	1950 aa		4.62	□□□□□ -1.67
FN1-219	ENST00000474036	SMIM30	A4D0T7	59 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TRAPPC13	A5PLN9	417 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	AGAP5	A6NIR3	686 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	KDM4E	B2RXH2	506 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CDC40	O60508	579 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CRLF1	O75462	422 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	STX11	O75558	287 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CDC123	O75794	336 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TOX	O94900	526 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	LYPD3	O95274	346 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SLC2A10	O95528	541 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	PLAU	P00749	431 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	DBI	P07108	87 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	HOXD4	P09016	255 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	HBQ1	P09105	142 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TSPAN19	P0C672	248 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	IFI30	P13284	250 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	RNH1	P13489	461 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	MYL12A	P19105	171 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	RPS4Y1	P22090	263 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	GTF2E2	P29084	291 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	S100A5	P33763	92 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SOX6	P35712	828 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	OMP	P47874	163 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	EMD	P50402	254 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	BCAP31	P51572	246 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	GAS1	P54826	345 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CDH11	P55287	796 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	LINC00205	P59089	165 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	DCAF7	P61962	342 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	RPS25	P62851	125 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TUBA1B	P68363	451 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	C1D	Q13901	141 aa	Known RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SPHAR	Q15513	63 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	OR1Q1	Q15612	314 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	NNAT	Q16517	81 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	PRICKLE4	Q2TBC4	344 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF791	Q3KP31	576 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TIMM50	Q3ZCQ8	353 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	KLHL22	Q53GT1	634 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	OR2G6	Q5TZ20	316 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	LIPK	Q5VXJ0	399 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	NIPAL1	Q6NVV3	410 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ZNF620	Q6ZNG0	422 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	MBOAT2	Q6ZWT7	520 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	TUBA1A	Q71U36	451 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	SLC22A16	Q86VW1	577 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	KMT5C	Q86Y97	462 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	NANOGP1	Q8N7R0	232 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ZFP41	Q8N8Y5	198 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	CDRT4	Q8N9R6	151 aa		4.61	□□□□□ -1.67
FN1-219	ENST00000474036	DRAXIN	Q8NBI3	349 aa	Predicted RBP	4.61	□□□□□ -1.67
FN1-219	ENST00000474036	ACBD4	Q8NC06	268 aa		4.61	□□□□□ -1.67

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