RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 NAA20P61599 178 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 BASP1P80723 227 aaKnown RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 LRRC63Q05C16 580 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 PPIL2Q13356 520 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 CYTH1Q15438 398 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 C1orf100Q5SVJ3 147 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 C1orf185Q5T7R7 199 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 TRIM40Q6P9F5 258 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 TMCO2Q7Z6W1 182 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 SCD5Q86SK9 330 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 ZNF546Q86UE3 836 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 LIX1Q8N485 282 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 CSGALNACT2Q8N6G5 542 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 BPIFCQ8NFQ6 507 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 OR52I1Q8NGK6 324 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 ANGPTL6Q8NI99 470 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 SUN5Q8TC36 379 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 CHCHD10Q8WYQ3 142 aaPredicted RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 UCN3Q969E3 161 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 BORCS5Q969J3 196 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 SERPINB12Q96P63 405 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 KCNA7Q96RP8 456 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 ARHGDIGQ99819 225 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 PELOQ9BRX2 385 aaKnown RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 TMEM59Q9BXS4 323 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 ROGDIQ9GZN7 287 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 Q9H521 79 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 SLC38A10Q9HBR0 1119 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 FGFR1OP2Q9NVK5 253 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 LYARQ9NX58 379 aaKnown RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 KIF25Q9UIL4 384 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 CLEC4EQ9ULY5 219 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 MMP17Q9ULZ9 603 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 VSIG4Q9Y279 399 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 XRN1Q8IZH2 1706 aaKnown RBP3.16□□□□□ -1.9
BRCA1-212ENST00000473961 BCL9LQ86UU0 1499 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 CD163L1Q9NR16 1453 aa3.16□□□□□ -1.9
BRCA1-212ENST00000473961 CAMSAP1Q5T5Y3 1602 aa3.15□□□□□ -1.9
BRCA1-212ENST00000473961 MYH1P12882 1939 aa3.15□□□□□ -1.9
BRCA1-212ENST00000473961 MYH2Q9UKX2 1941 aa3.15□□□□□ -1.9
BRCA1-212ENST00000473961 ARAP3Q8WWN8 1544 aa3.15□□□□□ -1.9
BRCA1-212ENST00000473961 KIF1BO60333 1816 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 A0A0G2JRQ6 117 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CCDC160A6NGH7 325 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 SMIM23A6NLE4 172 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 C12orf71A8MTZ7 269 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 GOLGA8MH3BSY2 632 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF701M0R085 212 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 SIRPB1O00241 398 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 PGRMC1O00264 195 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CDC7O00311 574 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 HAT1O14929 419 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 SLC22A1O15245 554 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 GYG2O15488 501 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 DENRO43583 198 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 DNAJB6O75190 326 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF780AO75290 641 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 HSPB1P04792 205 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CXCR2P25025 360 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 GTF2E2P29084 291 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 NAA10P41227 235 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 PPP1R2P41236 205 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CDK9P50750 372 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 SLC18A1P54219 525 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 DLX1P56177 255 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 RIPPLY3P57055 190 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 TAS2R19P59542 299 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ATP6V0D1P61421 351 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 EGFEM1PQ0D2K5 195 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 DNAJC3Q13217 504 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 RGS21Q2M5E4 152 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 TRMT5Q32P41 509 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF829Q3KNS6 432 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ACSBG2Q5FVE4 666 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 C6orf183Q5T699 404 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 SPOPLQ6IQ16 392 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 IZUMO2Q6UXV1 221 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CERS6Q6ZMG9 384 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 SLC16A14Q7RTX9 510 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 MYPOPQ86VE0 399 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 MMAAQ8IVH4 418 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 MICU2Q8IYU8 434 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 GABRG1Q8N1C3 465 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CD177Q8N6Q3 437 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 OR4A4PQ8NGN8 299 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 RHEBL1Q8TAI7 183 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 PLPPR1Q8TBJ4 325 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ZNF564Q8TBZ8 553 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 FAM110BQ8TC76 370 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 MRAPQ8TCY5 172 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 CXorf40AQ8TE69 158 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 RASSF5Q8WWW0 418 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 ACOT11Q8WXI4 607 aaPredicted RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 SMARCD2Q92925 531 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 TMA16Q96EY4 203 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 DNAJC1Q96KC8 554 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 RIOK2Q9BVS4 552 aaKnown RBP3.15□□□□□ -1.91
BRCA1-212ENST00000473961 C20orf85Q9H1P6 137 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 PSTPIP2Q9H939 334 aa3.15□□□□□ -1.91
BRCA1-212ENST00000473961 C12orf10Q9HB07 376 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms