RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 PRODH2Q9UF12 536 aa1.88□□□□□ -2.11
CALD1-216ENST00000473714 STOML2Q9UJZ1 356 aa1.88□□□□□ -2.11
CALD1-216ENST00000473714 TMCO1Q9UM00 188 aa1.88□□□□□ -2.11
CALD1-216ENST00000473714 COPS3Q9UNS2 423 aa1.88□□□□□ -2.11
CALD1-216ENST00000473714 SCML2Q9UQR0 700 aa1.88□□□□□ -2.11
CALD1-216ENST00000473714 IFT52Q9Y366 437 aa1.88□□□□□ -2.11
CALD1-216ENST00000473714 EXPH5Q8NEV8 1989 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 DNAH7Q8WXX0 4024 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 IGLV4-3A0A075B6K6 122 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 A0A087WYN8 130 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 IGHV3-20A0A0C4DH32 117 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 LRP5LA4QPB2 252 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 USP27XA6NNY8 438 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 MPTX1A8MV57 137 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 E9PLD3 99 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 G3V2L1 256 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 H3BMQ9 156 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 NR5A2O00482 541 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 OR7A17O14581 309 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 SLC16A4O15374 487 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 RNF13O43567 381 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ATP5LO75964 103 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 DIRAS1O95057 198 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CA1P00915 261 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 IGF1P05019 195 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 H2AFZP0C0S5 128 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ZSCAN5DPP0CG00 497 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 POU2F1P14859 743 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CPN1P15169 458 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ZNF30P17039 623 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 XRCC1P18887 633 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 PGCP20142 388 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 TBXA2RP21731 343 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CDH5P33151 784 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 RORAP35398 523 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 SYKP43405 635 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 RPL34P49207 117 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 CCT3P49368 545 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 STARP49675 285 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ACOT2P49753 483 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ATP4BP51164 291 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ARHGDIBP52566 201 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ATP1B3P54709 279 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 SH3BGRP55822 239 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 SEC61GP60059 68 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 RPS24P62847 133 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 OGDHQ02218 1023 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ZNF85Q03923 595 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 TRDNQ13061 729 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CUL1Q13616 776 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 NCF4Q15080 339 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 RBMY1FQ15415 496 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 KYAT1Q16773 422 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 NDUFA9Q16795 377 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CYP51A1Q16850 503 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 MICAQ29983 383 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 KLHL40Q2TBA0 621 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 TP53I3Q53FA7 332 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 DMRTC1Q5HYR2 192 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 PDZK1Q5T2W1 519 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 LGSNQ5TDP6 509 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 PRAMEF20Q5VT98 475 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 WDR25Q64LD2 544 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 OR4F3Q6IEY1 312 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 OR2A2Q6IF42 318 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CERS6Q6ZMG9 384 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CCDC73Q6ZRK6 1079 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 LRRC49Q8IUZ0 686 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 KLHDC8BQ8IXV7 354 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CADM2Q8N3J6 435 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 FAM184AQ8NB25 1140 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 Q8NBF4 154 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 OR56A4Q8NGH8 313 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 OR51G2Q8NGK0 314 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 OR4Q3Q8NH05 313 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 OR1F12Q8NHA8 337 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 C11orf45Q8TAV5 145 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 NANPQ8TBE9 248 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 M1APQ8TC57 530 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 AGR3Q8TD06 166 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 SLC37A2Q8TED4 501 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ZNF418Q8TF45 676 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 PIGCQ92535 297 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 RAPGEF5Q92565 580 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 STMN2Q93045 179 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 EFHD2Q96C19 240 aaPredicted RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 PELI1Q96FA3 418 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 TIMD4Q96H15 378 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 C9orf85Q96MD7 179 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 CITED1Q99966 193 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 MRPL45Q9BRJ2 306 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 CHRDL1Q9BU40 450 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 MCRIP2Q9BUT9 160 aaKnown RBP1.87□□□□□ -2.11
CALD1-216ENST00000473714 ANGPTL4Q9BY76 406 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 FGFBP2Q9BYJ0 223 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 GPR61Q9BZJ8 451 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 OCR1Q9BZK8 76 aa1.87□□□□□ -2.11
CALD1-216ENST00000473714 ROPN1BQ9BZX4 212 aaPredicted RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms